Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH1Q08174 AC018665.1-201ENST00000622927 1362 ntBASIC14.61□□□□□ -0.07
PCDH1Q08174 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH1Q08174 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH1Q08174 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH1Q08174 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
PCDH1Q08174 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDH1Q08174 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDH1Q08174 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDH1Q08174 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH1Q08174 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH1Q08174 ACTBP8-201ENST00000403258 1108 ntBASIC14.61□□□□□ -0.07
PCDH1Q08174 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDH1Q08174 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PCDH1Q08174 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDH1Q08174 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDH1Q08174 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDH1Q08174 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PCDH1Q08174 MIR4745-201ENST00000577608 62 ntBASIC14.61□□□□□ -0.07
PCDH1Q08174 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH1Q08174 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDH1Q08174 AC244517.3-201ENST00000616254 1235 ntBASIC14.61□□□□□ -0.07
PCDH1Q08174 AC005252.2-201ENST00000624630 1141 ntBASIC14.61□□□□□ -0.07
PCDH1Q08174 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDH1Q08174 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDH1Q08174 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH1Q08174 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH1Q08174 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PCDH1Q08174 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDH1Q08174 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH1Q08174 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH1Q08174 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PCDH1Q08174 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH1Q08174 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
PCDH1Q08174 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDH1Q08174 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDH1Q08174 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDH1Q08174 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH1Q08174 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
PCDH1Q08174 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH1Q08174 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDH1Q08174 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH1Q08174 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH1Q08174 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
PCDH1Q08174 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 AC026748.1-201ENST00000624349 3251 ntBASIC14.6□□□□□ -0.07
PCDH1Q08174 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
PCDH1Q08174 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 RNU1-114P-201ENST00000365297 166 ntBASIC14.6□□□□□ -0.07
PCDH1Q08174 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDH1Q08174 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PCDH1Q08174 KLF2P2-201ENST00000416807 1039 ntBASIC14.6□□□□□ -0.07
PCDH1Q08174 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.6□□□□□ -0.07
PCDH1Q08174 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDH1Q08174 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDH1Q08174 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
PCDH1Q08174 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
PCDH1Q08174 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.6□□□□□ -0.07
PCDH1Q08174 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.6□□□□□ -0.07
PCDH1Q08174 AP001063.1-201ENST00000568332 529 ntBASIC14.6□□□□□ -0.07
PCDH1Q08174 TP53TG3HP-202ENST00000569755 579 ntBASIC14.6□□□□□ -0.07
PCDH1Q08174 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.6□□□□□ -0.07
PCDH1Q08174 CLUHP6-201ENST00000580789 941 ntBASIC14.6□□□□□ -0.07
PCDH1Q08174 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PCDH1Q08174 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
PCDH1Q08174 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDH1Q08174 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
PCDH1Q08174 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDH1Q08174 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PCDH1Q08174 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PCDH1Q08174 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDH1Q08174 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PCDH1Q08174 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDH1Q08174 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PCDH1Q08174 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDH1Q08174 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDH1Q08174 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDH1Q08174 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH1Q08174 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PCDH1Q08174 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms