Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
AP3S2P59780 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
AP3S2P59780 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.05□□□□□ -0.32
AP3S2P59780 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.05□□□□□ -0.32
AP3S2P59780 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
AP3S2P59780 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.05□□□□□ -0.32
AP3S2P59780 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S2P59780 REXO1L6P-202ENST00000619970 1078 ntBASIC13.05□□□□□ -0.32
AP3S2P59780 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
AP3S2P59780 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.05□□□□□ -0.32
AP3S2P59780 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S2P59780 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S2P59780 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.05□□□□□ -0.32
AP3S2P59780 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
AP3S2P59780 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S2P59780 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S2P59780 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
AP3S2P59780 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S2P59780 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S2P59780 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.05□□□□□ -0.32
AP3S2P59780 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.04□□□□□ -0.32
AP3S2P59780 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.04□□□□□ -0.32
AP3S2P59780 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
AP3S2P59780 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.04□□□□□ -0.32
AP3S2P59780 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
AP3S2P59780 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
AP3S2P59780 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.04□□□□□ -0.32
AP3S2P59780 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
AP3S2P59780 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.04□□□□□ -0.32
AP3S2P59780 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.04□□□□□ -0.32
AP3S2P59780 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
AP3S2P59780 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.04□□□□□ -0.32
AP3S2P59780 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.04□□□□□ -0.32
AP3S2P59780 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.04□□□□□ -0.32
AP3S2P59780 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.04□□□□□ -0.32
AP3S2P59780 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.04□□□□□ -0.32
AP3S2P59780 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.04□□□□□ -0.32
AP3S2P59780 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.04□□□□□ -0.32
AP3S2P59780 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.04□□□□□ -0.32
AP3S2P59780 AC007064.4-201ENST00000637740 555 ntBASIC13.04□□□□□ -0.32
AP3S2P59780 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
AP3S2P59780 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
AP3S2P59780 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
AP3S2P59780 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
AP3S2P59780 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
AP3S2P59780 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S2P59780 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
AP3S2P59780 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
AP3S2P59780 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.03□□□□□ -0.32
AP3S2P59780 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.03□□□□□ -0.32
AP3S2P59780 PTPRVP-205ENST00000641549 5067 ntBASIC13.03□□□□□ -0.32
AP3S2P59780 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
AP3S2P59780 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
AP3S2P59780 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
AP3S2P59780 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
AP3S2P59780 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.03□□□□□ -0.32
AP3S2P59780 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S2P59780 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms