Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ITGA8P53708 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ITGA8P53708 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.57■□□□□ 0.08
ITGA8P53708 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ITGA8P53708 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
ITGA8P53708 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.57■□□□□ 0.08
ITGA8P53708 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ITGA8P53708 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.57■□□□□ 0.08
ITGA8P53708 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.57■□□□□ 0.08
ITGA8P53708 SDHAP3-202ENST00000515467 728 ntBASIC15.57■□□□□ 0.08
ITGA8P53708 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
ITGA8P53708 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.57■□□□□ 0.08
ITGA8P53708 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.57■□□□□ 0.08
ITGA8P53708 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.57■□□□□ 0.08
ITGA8P53708 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ITGA8P53708 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
ITGA8P53708 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.57■□□□□ 0.08
ITGA8P53708 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ITGA8P53708 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ITGA8P53708 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.57■□□□□ 0.08
ITGA8P53708 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.57■□□□□ 0.08
ITGA8P53708 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
ITGA8P53708 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ITGA8P53708 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ITGA8P53708 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ITGA8P53708 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ITGA8P53708 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
ITGA8P53708 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ITGA8P53708 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.57■□□□□ 0.08
ITGA8P53708 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.57■□□□□ 0.08
ITGA8P53708 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ITGA8P53708 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.57■□□□□ 0.08
ITGA8P53708 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ITGA8P53708 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ITGA8P53708 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
ITGA8P53708 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ITGA8P53708 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.56■□□□□ 0.08
ITGA8P53708 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.56■□□□□ 0.08
ITGA8P53708 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.56■□□□□ 0.08
ITGA8P53708 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ITGA8P53708 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ITGA8P53708 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.56■□□□□ 0.08
ITGA8P53708 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ITGA8P53708 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
ITGA8P53708 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.56■□□□□ 0.08
ITGA8P53708 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.56■□□□□ 0.08
ITGA8P53708 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.56■□□□□ 0.08
ITGA8P53708 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.56■□□□□ 0.08
ITGA8P53708 AC022447.6-201ENST00000515522 438 ntBASIC15.56■□□□□ 0.08
ITGA8P53708 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.56■□□□□ 0.08
ITGA8P53708 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.56■□□□□ 0.08
ITGA8P53708 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.56■□□□□ 0.08
ITGA8P53708 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.56■□□□□ 0.08
ITGA8P53708 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.56■□□□□ 0.08
ITGA8P53708 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.56■□□□□ 0.08
ITGA8P53708 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.56■□□□□ 0.08
ITGA8P53708 AC023090.2-201ENST00000625182 2110 ntBASIC15.56■□□□□ 0.08
ITGA8P53708 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.56■□□□□ 0.08
ITGA8P53708 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.56■□□□□ 0.08
ITGA8P53708 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.56■□□□□ 0.08
ITGA8P53708 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ITGA8P53708 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.56■□□□□ 0.08
ITGA8P53708 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITGA8P53708 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITGA8P53708 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ITGA8P53708 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
ITGA8P53708 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ITGA8P53708 AC067750.1-201ENST00000608826 6545 ntBASIC15.55■□□□□ 0.08
ITGA8P53708 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.55■□□□□ 0.08
ITGA8P53708 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITGA8P53708 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
ITGA8P53708 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.55■□□□□ 0.08
ITGA8P53708 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITGA8P53708 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.55■□□□□ 0.08
ITGA8P53708 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITGA8P53708 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITGA8P53708 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ITGA8P53708 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.55■□□□□ 0.08
ITGA8P53708 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms