Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
RFC4P35249 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC18.75■□□□□ 0.59
RFC4P35249 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFC4P35249 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFC4P35249 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.75■□□□□ 0.59
RFC4P35249 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFC4P35249 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RFC4P35249 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.75■□□□□ 0.59
RFC4P35249 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFC4P35249 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.75■□□□□ 0.59
RFC4P35249 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFC4P35249 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFC4P35249 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFC4P35249 AC018463.1-201ENST00000456674 917 ntBASIC18.75■□□□□ 0.59
RFC4P35249 CHCHD2P9-201ENST00000461726 456 ntBASIC18.75■□□□□ 0.59
RFC4P35249 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFC4P35249 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.75■□□□□ 0.59
RFC4P35249 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC18.75■□□□□ 0.59
RFC4P35249 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC18.75■□□□□ 0.59
RFC4P35249 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RFC4P35249 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.75■□□□□ 0.59
RFC4P35249 SIGLEC18P-201ENST00000602271 909 ntBASIC18.75■□□□□ 0.59
RFC4P35249 AC087392.5-201ENST00000612517 489 ntBASIC18.75■□□□□ 0.59
RFC4P35249 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RFC4P35249 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.75■□□□□ 0.59
RFC4P35249 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFC4P35249 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFC4P35249 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.75■□□□□ 0.59
RFC4P35249 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFC4P35249 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFC4P35249 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFC4P35249 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFC4P35249 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFC4P35249 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC18.74■□□□□ 0.59
RFC4P35249 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.74■□□□□ 0.59
RFC4P35249 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.74■□□□□ 0.59
RFC4P35249 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.74■□□□□ 0.59
RFC4P35249 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.74■□□□□ 0.59
RFC4P35249 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RFC4P35249 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.74■□□□□ 0.59
RFC4P35249 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC18.74■□□□□ 0.59
RFC4P35249 AL157792.1-201ENST00000488281 530 ntBASIC18.74■□□□□ 0.59
RFC4P35249 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.74■□□□□ 0.59
RFC4P35249 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
RFC4P35249 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.74■□□□□ 0.59
RFC4P35249 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC18.74■□□□□ 0.59
RFC4P35249 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.74■□□□□ 0.59
RFC4P35249 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
RFC4P35249 MIR4522-201ENST00000584932 87 ntBASIC18.74■□□□□ 0.59
RFC4P35249 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.74■□□□□ 0.59
RFC4P35249 MIR6858-201ENST00000620733 67 ntBASIC18.74■□□□□ 0.59
RFC4P35249 AL161773.1-201ENST00000624845 863 ntBASIC18.74■□□□□ 0.59
RFC4P35249 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.74■□□□□ 0.59
RFC4P35249 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.74■□□□□ 0.59
RFC4P35249 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.74■□□□□ 0.59
RFC4P35249 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.74■□□□□ 0.59
RFC4P35249 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.74■□□□□ 0.59
RFC4P35249 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.74■□□□□ 0.59
RFC4P35249 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.74■□□□□ 0.59
RFC4P35249 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFC4P35249 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.74■□□□□ 0.59
RFC4P35249 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC4P35249 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.73■□□□□ 0.59
RFC4P35249 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.73■□□□□ 0.59
RFC4P35249 SALL4P5-201ENST00000419001 1760 ntBASIC18.73■□□□□ 0.59
RFC4P35249 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC4P35249 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.73■□□□□ 0.59
RFC4P35249 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC4P35249 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RFC4P35249 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC4P35249 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC4P35249 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC18.73■□□□□ 0.59
RFC4P35249 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC4P35249 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RFC4P35249 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC4P35249 MIR557-201ENST00000385239 98 ntBASIC18.73■□□□□ 0.59
RFC4P35249 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC4P35249 BANF1P3-201ENST00000412556 261 ntBASIC18.73■□□□□ 0.59
RFC4P35249 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFC4P35249 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC18.73■□□□□ 0.59
RFC4P35249 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.73■□□□□ 0.59
RFC4P35249 RPL18AP3-201ENST00000462885 528 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms