Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.33□□□□□ -0.28
RAB3BP20337 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
RAB3BP20337 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.33□□□□□ -0.28
RAB3BP20337 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
RAB3BP20337 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
RAB3BP20337 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RAB3BP20337 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB3BP20337 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RAB3BP20337 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB3BP20337 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB3BP20337 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
RAB3BP20337 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
RAB3BP20337 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB3BP20337 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
RAB3BP20337 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RAB3BP20337 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB3BP20337 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RAB3BP20337 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
RAB3BP20337 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 IGHV3-62-201ENST00000520057 340 ntBASIC13.32□□□□□ -0.28
RAB3BP20337 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB3BP20337 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.32□□□□□ -0.28
RAB3BP20337 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.32□□□□□ -0.28
RAB3BP20337 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.32□□□□□ -0.28
RAB3BP20337 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.32□□□□□ -0.28
RAB3BP20337 AC025181.2-201ENST00000606994 802 ntBASIC13.32□□□□□ -0.28
RAB3BP20337 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB3BP20337 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB3BP20337 AL356585.2-201ENST00000625078 2396 ntBASIC13.32□□□□□ -0.28
RAB3BP20337 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 PEG13-201ENST00000631594 5667 ntBASIC13.32□□□□□ -0.28
RAB3BP20337 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RAB3BP20337 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB3BP20337 TCAF1P1-201ENST00000414990 2232 ntBASIC13.32□□□□□ -0.28
RAB3BP20337 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RAB3BP20337 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB3BP20337 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RAB3BP20337 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB3BP20337 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB3BP20337 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB3BP20337 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB3BP20337 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
RAB3BP20337 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB3BP20337 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB3BP20337 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB3BP20337 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB3BP20337 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB3BP20337 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB3BP20337 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB3BP20337 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB3BP20337 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB3BP20337 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
RAB3BP20337 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RAB3BP20337 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.31□□□□□ -0.28
RAB3BP20337 SPCS2P4-201ENST00000436160 681 ntBASIC13.31□□□□□ -0.28
RAB3BP20337 HIST3H2BA-201ENST00000436555 524 ntBASIC13.31□□□□□ -0.28
RAB3BP20337 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms