Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLP19338 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NCLP19338 AC097359.2-201ENST00000604992 2389 ntBASIC18.15■□□□□ 0.5
NCLP19338 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
NCLP19338 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.14■□□□□ 0.5
NCLP19338 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC18.14■□□□□ 0.5
NCLP19338 AC027601.5-201ENST00000624065 2482 ntBASIC18.14■□□□□ 0.5
NCLP19338 CICP11-201ENST00000434745 2827 ntBASIC18.14■□□□□ 0.5
NCLP19338 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NCLP19338 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.14■□□□□ 0.49
NCLP19338 C1R-201ENST00000535233 2211 ntTSL 2 BASIC18.14■□□□□ 0.49
NCLP19338 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCLP19338 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NCLP19338 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.14■□□□□ 0.49
NCLP19338 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCLP19338 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
NCLP19338 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.14■□□□□ 0.49
NCLP19338 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.14■□□□□ 0.49
NCLP19338 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.14■□□□□ 0.49
NCLP19338 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCLP19338 RBPMS2P1-201ENST00000437762 623 ntBASIC18.14■□□□□ 0.49
NCLP19338 FAM86GP-201ENST00000448322 971 ntBASIC18.14■□□□□ 0.49
NCLP19338 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.14■□□□□ 0.49
NCLP19338 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.14■□□□□ 0.49
NCLP19338 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.14■□□□□ 0.49
NCLP19338 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
NCLP19338 Z92544.3-201ENST00000624747 417 ntBASIC18.14■□□□□ 0.49
NCLP19338 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCLP19338 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.14■□□□□ 0.49
NCLP19338 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NCLP19338 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NCLP19338 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC18.14■□□□□ 0.49
NCLP19338 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC18.14■□□□□ 0.49
NCLP19338 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCLP19338 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NCLP19338 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NCLP19338 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCLP19338 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCLP19338 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCLP19338 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC18.14■□□□□ 0.49
NCLP19338 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 USP3-204ENST00000540797 5474 ntTSL 2 BASIC18.13■□□□□ 0.49
NCLP19338 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
NCLP19338 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
NCLP19338 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.13■□□□□ 0.49
NCLP19338 AZGP1P1-201ENST00000411909 902 ntBASIC18.13■□□□□ 0.49
NCLP19338 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.13■□□□□ 0.49
NCLP19338 AC067863.1-201ENST00000494933 530 ntBASIC18.13■□□□□ 0.49
NCLP19338 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.13■□□□□ 0.49
NCLP19338 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.13■□□□□ 0.49
NCLP19338 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
NCLP19338 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.13■□□□□ 0.49
NCLP19338 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.13■□□□□ 0.49
NCLP19338 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.13■□□□□ 0.49
NCLP19338 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.13■□□□□ 0.49
NCLP19338 AC097359.3-201ENST00000603982 1210 ntBASIC18.13■□□□□ 0.49
NCLP19338 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.13■□□□□ 0.49
NCLP19338 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.13■□□□□ 0.49
NCLP19338 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NCLP19338 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
NCLP19338 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC18.13■□□□□ 0.49
NCLP19338 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.13■□□□□ 0.49
NCLP19338 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCLP19338 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.13■□□□□ 0.49
NCLP19338 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCLP19338 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NCLP19338 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCLP19338 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCLP19338 RET-205ENST00000615310 4337 ntTSL 5 BASIC18.12■□□□□ 0.49
NCLP19338 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCLP19338 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCLP19338 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCLP19338 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.12■□□□□ 0.49
NCLP19338 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NCLP19338 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.12■□□□□ 0.49
NCLP19338 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCLP19338 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NCLP19338 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.12■□□□□ 0.49
NCLP19338 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
NCLP19338 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms