Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 AC104692.2-201ENST00000603054 253 ntBASIC11.43□□□□□ -0.58
LTAP01374 AC074044.1-201ENST00000609673 707 ntBASIC11.43□□□□□ -0.58
LTAP01374 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.43□□□□□ -0.58
LTAP01374 AC055717.3-201ENST00000622967 595 ntBASIC11.43□□□□□ -0.58
LTAP01374 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
LTAP01374 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
LTAP01374 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.43□□□□□ -0.58
LTAP01374 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.43□□□□□ -0.58
LTAP01374 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LTAP01374 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LTAP01374 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LTAP01374 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
LTAP01374 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.43□□□□□ -0.58
LTAP01374 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LTAP01374 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
LTAP01374 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LTAP01374 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
LTAP01374 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
LTAP01374 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.42□□□□□ -0.58
LTAP01374 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
LTAP01374 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.42□□□□□ -0.58
LTAP01374 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
LTAP01374 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.42□□□□□ -0.58
LTAP01374 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 MRPL3P1-201ENST00000400109 1033 ntBASIC11.42□□□□□ -0.58
LTAP01374 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.42□□□□□ -0.58
LTAP01374 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 KRT18P64-201ENST00000434946 1219 ntBASIC11.42□□□□□ -0.58
LTAP01374 FAM58CP-201ENST00000435741 640 ntBASIC11.42□□□□□ -0.58
LTAP01374 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.42□□□□□ -0.58
LTAP01374 GATB-205ENST00000508611 605 ntTSL 2 BASIC11.42□□□□□ -0.58
LTAP01374 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.42□□□□□ -0.58
LTAP01374 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.42□□□□□ -0.58
LTAP01374 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC11.42□□□□□ -0.58
LTAP01374 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.42□□□□□ -0.58
LTAP01374 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.42□□□□□ -0.58
LTAP01374 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.42□□□□□ -0.58
LTAP01374 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.42□□□□□ -0.58
LTAP01374 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.42□□□□□ -0.58
LTAP01374 DGCR9-201ENST00000609630 2415 ntBASIC11.42□□□□□ -0.58
LTAP01374 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
LTAP01374 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
LTAP01374 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
LTAP01374 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.42□□□□□ -0.58
LTAP01374 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.42□□□□□ -0.58
LTAP01374 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
LTAP01374 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.42□□□□□ -0.58
LTAP01374 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.42□□□□□ -0.58
LTAP01374 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.42□□□□□ -0.58
LTAP01374 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
LTAP01374 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.42□□□□□ -0.58
LTAP01374 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LTAP01374 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.42□□□□□ -0.58
LTAP01374 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
LTAP01374 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LTAP01374 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LTAP01374 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.41□□□□□ -0.58
LTAP01374 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
LTAP01374 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LTAP01374 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LTAP01374 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.41□□□□□ -0.58
LTAP01374 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LTAP01374 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LTAP01374 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
LTAP01374 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LTAP01374 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LTAP01374 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LTAP01374 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
LTAP01374 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LTAP01374 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.41□□□□□ -0.58
LTAP01374 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
LTAP01374 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LTAP01374 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LTAP01374 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LTAP01374 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms