Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
CHD1O14646 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1O14646 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1O14646 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1O14646 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
CHD1O14646 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1O14646 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1O14646 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
CHD1O14646 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1O14646 AHCYP3-201ENST00000420053 1279 ntBASIC23.47■■□□□ 1.35
CHD1O14646 VENTXP4-201ENST00000449029 958 ntBASIC23.47■■□□□ 1.35
CHD1O14646 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC23.47■■□□□ 1.35
CHD1O14646 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC23.47■■□□□ 1.35
CHD1O14646 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC23.47■■□□□ 1.35
CHD1O14646 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC23.47■■□□□ 1.35
CHD1O14646 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC23.47■■□□□ 1.35
CHD1O14646 AC254633.1-201ENST00000606790 345 ntBASIC23.47■■□□□ 1.35
CHD1O14646 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1O14646 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1O14646 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1O14646 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1O14646 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1O14646 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC23.47■■□□□ 1.35
CHD1O14646 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1O14646 AC006328.1-201ENST00000437571 379 ntBASIC23.47■■□□□ 1.35
CHD1O14646 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC23.47■■□□□ 1.35
CHD1O14646 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
CHD1O14646 AC091304.3-201ENST00000566500 716 ntBASIC23.47■■□□□ 1.35
CHD1O14646 AC020922.4-201ENST00000621389 339 ntBASIC23.47■■□□□ 1.35
CHD1O14646 AC026336.4-201ENST00000624565 1050 ntBASIC23.47■■□□□ 1.35
CHD1O14646 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC23.47■■□□□ 1.35
CHD1O14646 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1O14646 SSR4P1-203ENST00000599569 2260 ntBASIC23.47■■□□□ 1.35
CHD1O14646 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1O14646 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
CHD1O14646 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
CHD1O14646 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC23.46■■□□□ 1.35
CHD1O14646 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD1O14646 ODCP-201ENST00000459650 1639 ntBASIC23.46■■□□□ 1.35
CHD1O14646 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD1O14646 LINC00265-2P-201ENST00000413372 782 ntBASIC23.46■■□□□ 1.35
CHD1O14646 AL450487.2-201ENST00000615934 407 ntBASIC23.46■■□□□ 1.35
CHD1O14646 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD1O14646 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD1O14646 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC23.46■■□□□ 1.35
CHD1O14646 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC23.46■■□□□ 1.35
CHD1O14646 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
CHD1O14646 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD1O14646 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CHD1O14646 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC23.46■■□□□ 1.35
CHD1O14646 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD1O14646 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC23.46■■□□□ 1.35
CHD1O14646 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CHD1O14646 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CHD1O14646 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CHD1O14646 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
CHD1O14646 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1O14646 ZNF877P-201ENST00000437614 612 ntBASIC23.45■■□□□ 1.34
CHD1O14646 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC23.45■■□□□ 1.34
CHD1O14646 CSTP2-201ENST00000610599 398 ntBASIC23.45■■□□□ 1.34
CHD1O14646 AC005746.3-201ENST00000614751 393 ntBASIC23.45■■□□□ 1.34
CHD1O14646 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1O14646 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC23.45■■□□□ 1.34
CHD1O14646 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1O14646 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1O14646 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1O14646 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1O14646 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1O14646 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1O14646 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1O14646 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC23.45■■□□□ 1.34
CHD1O14646 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1O14646 AC024909.3-201ENST00000611513 2257 ntBASIC23.45■■□□□ 1.34
CHD1O14646 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1O14646 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC23.45■■□□□ 1.34
CHD1O14646 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1O14646 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1O14646 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1O14646 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1O14646 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1O14646 GCK-209ENST00000616242 2260 ntTSL 5 BASIC23.45■■□□□ 1.34
CHD1O14646 MIR611-201ENST00000384869 67 ntBASIC23.45■■□□□ 1.34
CHD1O14646 HLA-DMA-202ENST00000395303 1007 ntBASIC23.45■■□□□ 1.34
CHD1O14646 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC23.45■■□□□ 1.34
CHD1O14646 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC23.45■■□□□ 1.34
CHD1O14646 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC23.45■■□□□ 1.34
CHD1O14646 BMF-206ENST00000558774 671 ntTSL 3 BASIC23.45■■□□□ 1.34
CHD1O14646 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC23.45■■□□□ 1.34
CHD1O14646 URAHP-205ENST00000610227 398 ntBASIC23.45■■□□□ 1.34
CHD1O14646 AL591471.1-201ENST00000621855 229 ntBASIC23.45■■□□□ 1.34
CHD1O14646 AC010531.8-201ENST00000623341 685 ntBASIC23.45■■□□□ 1.34
CHD1O14646 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1O14646 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC23.44■■□□□ 1.34
CHD1O14646 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1O14646 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1O14646 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1O14646 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC23.44■■□□□ 1.34
CHD1O14646 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC23.44■■□□□ 1.34
CHD1O14646 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC23.44■■□□□ 1.34
CHD1O14646 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms