Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 AL022342.1-201ENST00000400363 863 ntBASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 SPDYE17-201ENST00000412399 783 ntBASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 HIST3H2BA-201ENST00000436555 524 ntBASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RIMS3Q9UJD0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 AC020658.7-201ENST00000624274 2442 ntBASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 CR383656.2-201ENST00000548656 2254 ntBASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 AC093520.2-201ENST00000561830 333 ntBASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 AL513210.1-201ENST00000629608 234 ntBASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 Z82170.1-201ENST00000625081 3192 ntBASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIMS3Q9UJD0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIMS3Q9UJD0 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms