Protein–RNA interactions for Protein: Q9UHC1

MLH3, DNA mismatch repair protein Mlh3, humanhuman

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3Q9UHC1 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 USB1-205ENST00000561743 1135 ntTSL 3 BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 AC148477.9-201ENST00000623974 539 ntBASIC21.72■■□□□ 1.07
MLH3Q9UHC1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC21.72■■□□□ 1.07
MLH3Q9UHC1 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 ACTG1P19-201ENST00000418987 1116 ntBASIC21.71■■□□□ 1.07
MLH3Q9UHC1 KRT18P46-201ENST00000435568 1279 ntBASIC21.71■■□□□ 1.07
MLH3Q9UHC1 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 DGAT2L7P-201ENST00000602462 744 ntBASIC21.71■■□□□ 1.07
MLH3Q9UHC1 AC006483.2-201ENST00000609813 515 ntBASIC21.71■■□□□ 1.07
MLH3Q9UHC1 HELLS-212ENST00000630929 400 ntTSL 5 BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 WASH3P-207ENST00000560956 1394 ntBASIC21.71■■□□□ 1.07
MLH3Q9UHC1 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC21.71■■□□□ 1.07
MLH3Q9UHC1 MIR6746-201ENST00000620971 63 ntBASIC21.71■■□□□ 1.07
MLH3Q9UHC1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
MLH3Q9UHC1 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 AC026470.1-201ENST00000478038 846 ntBASIC21.7■■□□□ 1.06
MLH3Q9UHC1 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 HMGB1P24-201ENST00000611897 328 ntBASIC21.7■■□□□ 1.06
MLH3Q9UHC1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 AC023024.2-201ENST00000623561 1993 ntBASIC21.7■■□□□ 1.06
MLH3Q9UHC1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MLH3Q9UHC1 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
MLH3Q9UHC1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC21.69■■□□□ 1.06
MLH3Q9UHC1 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MLH3Q9UHC1 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC21.69■■□□□ 1.06
MLH3Q9UHC1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
MLH3Q9UHC1 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MLH3Q9UHC1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MLH3Q9UHC1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
MLH3Q9UHC1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC21.69■■□□□ 1.06
MLH3Q9UHC1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MLH3Q9UHC1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MLH3Q9UHC1 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MLH3Q9UHC1 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
MLH3Q9UHC1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms