Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 HLA-H-201ENST00000383620 1096 ntBASIC14.82□□□□□ -0.04
HIPK4Q8NE63 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 MED15P5-201ENST00000423150 992 ntBASIC14.82□□□□□ -0.04
HIPK4Q8NE63 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 KRT18P3-201ENST00000451602 1288 ntBASIC14.82□□□□□ -0.04
HIPK4Q8NE63 AL139010.1-201ENST00000454878 894 ntBASIC14.82□□□□□ -0.04
HIPK4Q8NE63 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 KRT8P37-201ENST00000451609 1420 ntBASIC14.82□□□□□ -0.04
HIPK4Q8NE63 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIPK4Q8NE63 CYP4F24P-201ENST00000586049 1580 ntBASIC14.81□□□□□ -0.04
HIPK4Q8NE63 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 MST1P2-201ENST00000457982 2291 ntBASIC14.81□□□□□ -0.04
HIPK4Q8NE63 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 AL590627.1-203ENST00000421194 1026 ntBASIC14.81□□□□□ -0.04
HIPK4Q8NE63 EEF1DP4-201ENST00000446006 880 ntBASIC14.81□□□□□ -0.04
HIPK4Q8NE63 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 PHKG1P2-201ENST00000457537 863 ntBASIC14.81□□□□□ -0.04
HIPK4Q8NE63 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 AC140113.2-201ENST00000604370 208 ntBASIC14.81□□□□□ -0.04
HIPK4Q8NE63 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 FAM197Y3-203ENST00000618346 717 ntBASIC14.81□□□□□ -0.04
HIPK4Q8NE63 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.81□□□□□ -0.04
HIPK4Q8NE63 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HIPK4Q8NE63 AC011474.4-201ENST00000623523 2076 ntBASIC14.8□□□□□ -0.04
HIPK4Q8NE63 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms