Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 HLA-DMA-203ENST00000395305 777 ntBASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 AC027237.1-201ENST00000560942 655 ntBASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 AC055811.3-201ENST00000584952 686 ntBASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 AC092127.1-201ENST00000567093 3455 ntBASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 FRMPD2B-201ENST00000431305 1347 ntBASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 AL645933.1-201ENST00000440087 609 ntBASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 AP005264.6-204ENST00000588436 719 ntBASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 AC055811.4-201ENST00000624039 1754 ntBASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 AL645608.8-201ENST00000606034 2086 ntBASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 REXO1L2P-201ENST00000425429 2069 ntBASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 IGHEP1-201ENST00000521393 651 ntBASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 RN7SL81P-201ENST00000493781 261 ntBASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 GDNF-207ENST00000515058 764 ntTSL 5 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC168Q8NDH2 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms