Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.33■□□□□ 0.05
SYNPOQ8N3V7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SYNPOQ8N3V7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SYNPOQ8N3V7 AC013268.4-201ENST00000637413 2228 ntBASIC15.33■□□□□ 0.05
SYNPOQ8N3V7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.33■□□□□ 0.05
SYNPOQ8N3V7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SYNPOQ8N3V7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.33■□□□□ 0.05
SYNPOQ8N3V7 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SYNPOQ8N3V7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SYNPOQ8N3V7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.33■□□□□ 0.05
SYNPOQ8N3V7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SYNPOQ8N3V7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SYNPOQ8N3V7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SYNPOQ8N3V7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 PRAL-201ENST00000624952 3286 ntBASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 MIR33B-201ENST00000385104 96 ntBASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 NUP210P1-202ENST00000504322 710 ntBASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 AC144831.1-201ENST00000573312 2656 ntBASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SYNPOQ8N3V7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 AL596276.2-201ENST00000447525 331 ntBASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 EEF1DP6-201ENST00000449232 372 ntBASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 AL353637.1-201ENST00000451571 732 ntBASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 RN7SL574P-201ENST00000581512 297 ntBASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 AL162426.1-201ENST00000624141 743 ntBASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 AC068418.2-201ENST00000577309 3703 ntBASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SYNPOQ8N3V7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms