Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 Z97205.2-201ENST00000564697 1639 ntBASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 C20orf181-201ENST00000623918 480 ntBASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUDCD3Q8IVD9 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 MBLAC2-202ENST00000514906 1936 ntBASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 AC007967.4-201ENST00000614700 386 ntBASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 AF228730.6-201ENST00000641497 218 ntBASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 AC084121.3-201ENST00000641716 218 ntBASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUDCD3Q8IVD9 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NUDCD3Q8IVD9 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms