Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.2□□□□□ -0.3
UBA52P62987 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
UBA52P62987 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
UBA52P62987 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UBA52P62987 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
UBA52P62987 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
UBA52P62987 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
UBA52P62987 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.19□□□□□ -0.3
UBA52P62987 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.19□□□□□ -0.3
UBA52P62987 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.19□□□□□ -0.3
UBA52P62987 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UBA52P62987 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
UBA52P62987 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
UBA52P62987 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
UBA52P62987 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.19□□□□□ -0.3
UBA52P62987 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.19□□□□□ -0.3
UBA52P62987 ATP5G2P4-201ENST00000442175 420 ntBASIC13.19□□□□□ -0.3
UBA52P62987 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.19□□□□□ -0.3
UBA52P62987 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.19□□□□□ -0.3
UBA52P62987 TP53TG3HP-202ENST00000569755 579 ntBASIC13.19□□□□□ -0.3
UBA52P62987 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.19□□□□□ -0.3
UBA52P62987 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.19□□□□□ -0.3
UBA52P62987 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.19□□□□□ -0.3
UBA52P62987 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.19□□□□□ -0.3
UBA52P62987 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.19□□□□□ -0.3
UBA52P62987 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 AL132655.2-201ENST00000596276 594 ntBASIC13.19□□□□□ -0.3
UBA52P62987 AC008738.7-201ENST00000609744 511 ntBASIC13.19□□□□□ -0.3
UBA52P62987 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.19□□□□□ -0.3
UBA52P62987 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.19□□□□□ -0.3
UBA52P62987 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.19□□□□□ -0.3
UBA52P62987 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
UBA52P62987 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
UBA52P62987 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
UBA52P62987 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.19□□□□□ -0.3
UBA52P62987 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.19□□□□□ -0.3
UBA52P62987 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
UBA52P62987 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.19□□□□□ -0.3
UBA52P62987 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBA52P62987 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
UBA52P62987 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UBA52P62987 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.18□□□□□ -0.3
UBA52P62987 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
UBA52P62987 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBA52P62987 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms