Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN12P56749 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN12P56749 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN12P56749 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN12P56749 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN12P56749 AC074338.1-201ENST00000416825 156 ntBASIC13.24□□□□□ -0.29
CLDN12P56749 AL353705.2-201ENST00000428243 662 ntBASIC13.24□□□□□ -0.29
CLDN12P56749 KRT18P64-201ENST00000434946 1219 ntBASIC13.24□□□□□ -0.29
CLDN12P56749 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
CLDN12P56749 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDN12P56749 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDN12P56749 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDN12P56749 AC025181.2-201ENST00000606994 802 ntBASIC13.24□□□□□ -0.29
CLDN12P56749 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDN12P56749 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN12P56749 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN12P56749 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDN12P56749 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CLDN12P56749 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN12P56749 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CLDN12P56749 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDN12P56749 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CLDN12P56749 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN12P56749 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CLDN12P56749 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN12P56749 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CLDN12P56749 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN12P56749 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN12P56749 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CLDN12P56749 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDN12P56749 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CLDN12P56749 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDN12P56749 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDN12P56749 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CLDN12P56749 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDN12P56749 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDN12P56749 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
CLDN12P56749 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
CLDN12P56749 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CLDN12P56749 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN12P56749 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN12P56749 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CLDN12P56749 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN12P56749 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CLDN12P56749 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
CLDN12P56749 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN12P56749 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDN12P56749 AC023274.1-201ENST00000418278 595 ntBASIC13.23□□□□□ -0.29
CLDN12P56749 AL450487.1-201ENST00000426799 995 ntBASIC13.23□□□□□ -0.29
CLDN12P56749 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.23□□□□□ -0.29
CLDN12P56749 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDN12P56749 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN12P56749 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.23□□□□□ -0.29
CLDN12P56749 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN12P56749 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDN12P56749 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.23□□□□□ -0.29
CLDN12P56749 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN12P56749 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CLDN12P56749 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CLDN12P56749 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN12P56749 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDN12P56749 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CLDN12P56749 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN12P56749 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN12P56749 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CLDN12P56749 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 CICP8-201ENST00000455800 2813 ntBASIC13.22□□□□□ -0.29
CLDN12P56749 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN12P56749 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN12P56749 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.22□□□□□ -0.29
CLDN12P56749 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CLDN12P56749 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms