Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THBS4P35443 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THBS4P35443 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS4P35443 AC232323.1-201ENST00000540724 2099 ntBASIC13.39□□□□□ -0.27
THBS4P35443 REXO1L5P-201ENST00000622260 2098 ntBASIC13.39□□□□□ -0.27
THBS4P35443 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.39□□□□□ -0.27
THBS4P35443 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
THBS4P35443 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.39□□□□□ -0.27
THBS4P35443 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THBS4P35443 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS4P35443 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THBS4P35443 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS4P35443 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS4P35443 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.39□□□□□ -0.27
THBS4P35443 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS4P35443 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS4P35443 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.39□□□□□ -0.27
THBS4P35443 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.39□□□□□ -0.27
THBS4P35443 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THBS4P35443 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS4P35443 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
THBS4P35443 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THBS4P35443 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS4P35443 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.39□□□□□ -0.27
THBS4P35443 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS4P35443 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.39□□□□□ -0.27
THBS4P35443 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.38□□□□□ -0.27
THBS4P35443 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.38□□□□□ -0.27
THBS4P35443 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
THBS4P35443 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
THBS4P35443 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 REXO1L2P-201ENST00000425429 2069 ntBASIC13.38□□□□□ -0.27
THBS4P35443 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.38□□□□□ -0.27
THBS4P35443 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
THBS4P35443 AL365209.1-201ENST00000624418 6473 ntBASIC13.38□□□□□ -0.27
THBS4P35443 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
THBS4P35443 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.38□□□□□ -0.27
THBS4P35443 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 AL162726.2-201ENST00000438986 1017 ntBASIC13.38□□□□□ -0.27
THBS4P35443 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.38□□□□□ -0.27
THBS4P35443 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.38□□□□□ -0.27
THBS4P35443 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.38□□□□□ -0.27
THBS4P35443 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.38□□□□□ -0.27
THBS4P35443 AC120045.2-201ENST00000567334 178 ntBASIC13.38□□□□□ -0.27
THBS4P35443 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.38□□□□□ -0.27
THBS4P35443 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.38□□□□□ -0.27
THBS4P35443 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
THBS4P35443 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
THBS4P35443 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.38□□□□□ -0.27
THBS4P35443 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
THBS4P35443 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.38□□□□□ -0.27
THBS4P35443 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
THBS4P35443 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 ACE3P-201ENST00000423435 1973 ntBASIC13.38□□□□□ -0.27
THBS4P35443 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.38□□□□□ -0.27
THBS4P35443 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
THBS4P35443 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.38□□□□□ -0.27
THBS4P35443 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS4P35443 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THBS4P35443 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS4P35443 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.37□□□□□ -0.27
THBS4P35443 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.37□□□□□ -0.27
THBS4P35443 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS4P35443 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS4P35443 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THBS4P35443 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
THBS4P35443 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.37□□□□□ -0.27
THBS4P35443 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.37□□□□□ -0.27
THBS4P35443 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS4P35443 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS4P35443 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS4P35443 GRK6P1-201ENST00000400595 1711 ntBASIC13.37□□□□□ -0.27
THBS4P35443 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS4P35443 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
THBS4P35443 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS4P35443 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
THBS4P35443 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms