Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL109837.1-201ENST00000603272 613 ntBASIC16.23■□□□□ 0.19
HOXC8P31273 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HOXC8P31273 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.23■□□□□ 0.19
HOXC8P31273 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.23■□□□□ 0.19
HOXC8P31273 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC8P31273 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.23■□□□□ 0.19
HOXC8P31273 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
HOXC8P31273 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC8P31273 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC8P31273 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC8P31273 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HOXC8P31273 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.23■□□□□ 0.19
HOXC8P31273 FAM90A2P-201ENST00000511144 1395 ntBASIC16.23■□□□□ 0.19
HOXC8P31273 FAM90A25P-201ENST00000528404 1395 ntBASIC16.23■□□□□ 0.19
HOXC8P31273 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.23■□□□□ 0.19
HOXC8P31273 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HOXC8P31273 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC8P31273 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC8P31273 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC8P31273 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.22■□□□□ 0.19
HOXC8P31273 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
HOXC8P31273 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.22■□□□□ 0.19
HOXC8P31273 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.22■□□□□ 0.19
HOXC8P31273 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.22■□□□□ 0.19
HOXC8P31273 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
HOXC8P31273 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.22■□□□□ 0.19
HOXC8P31273 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.22■□□□□ 0.19
HOXC8P31273 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 RPL17P11-201ENST00000417593 544 ntBASIC16.22■□□□□ 0.19
HOXC8P31273 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.22■□□□□ 0.19
HOXC8P31273 FGFR3P1-201ENST00000449999 601 ntBASIC16.22■□□□□ 0.19
HOXC8P31273 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.22■□□□□ 0.19
HOXC8P31273 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.22■□□□□ 0.19
HOXC8P31273 IGLV3-15-201ENST00000518356 244 ntBASIC16.22■□□□□ 0.19
HOXC8P31273 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.22■□□□□ 0.19
HOXC8P31273 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.22■□□□□ 0.19
HOXC8P31273 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.22■□□□□ 0.19
HOXC8P31273 AC138894.2-201ENST00000602838 371 ntBASIC16.22■□□□□ 0.19
HOXC8P31273 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.22■□□□□ 0.19
HOXC8P31273 MIR6727-201ENST00000620702 65 ntBASIC16.22■□□□□ 0.19
HOXC8P31273 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 YRDCP1-201ENST00000621419 643 ntBASIC16.22■□□□□ 0.19
HOXC8P31273 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
HOXC8P31273 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.22■□□□□ 0.19
HOXC8P31273 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.22■□□□□ 0.19
HOXC8P31273 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.22■□□□□ 0.19
HOXC8P31273 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC8P31273 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HOXC8P31273 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 AHCYP4-201ENST00000419201 1315 ntBASIC16.21■□□□□ 0.19
HOXC8P31273 FRMPD2B-201ENST00000431305 1347 ntBASIC16.21■□□□□ 0.19
HOXC8P31273 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.21■□□□□ 0.19
HOXC8P31273 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HOXC8P31273 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.21■□□□□ 0.19
HOXC8P31273 AC009093.10-201ENST00000641956 1442 ntBASIC16.21■□□□□ 0.19
HOXC8P31273 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.21■□□□□ 0.19
HOXC8P31273 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.21■□□□□ 0.19
HOXC8P31273 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HOXC8P31273 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.21■□□□□ 0.19
HOXC8P31273 OR2R1P-201ENST00000441404 914 ntBASIC16.21■□□□□ 0.19
HOXC8P31273 NOC2LP1-201ENST00000450578 752 ntBASIC16.21■□□□□ 0.19
HOXC8P31273 LDHBP1-201ENST00000455730 1119 ntBASIC16.21■□□□□ 0.19
HOXC8P31273 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.21■□□□□ 0.19
HOXC8P31273 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.21■□□□□ 0.19
HOXC8P31273 IQSEC3P1-201ENST00000538799 536 ntBASIC16.21■□□□□ 0.19
HOXC8P31273 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.21■□□□□ 0.19
HOXC8P31273 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.21■□□□□ 0.19
HOXC8P31273 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.21■□□□□ 0.19
HOXC8P31273 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HOXC8P31273 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms