Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.9□□□□□ -0.34
VAMP1P23763 MIR3652-201ENST00000579335 131 ntBASIC12.9□□□□□ -0.34
VAMP1P23763 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
VAMP1P23763 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.9□□□□□ -0.34
VAMP1P23763 SPTSSB-204ENST00000617024 1292 ntBASIC12.9□□□□□ -0.34
VAMP1P23763 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.9□□□□□ -0.34
VAMP1P23763 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.9□□□□□ -0.34
VAMP1P23763 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VAMP1P23763 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.9□□□□□ -0.34
VAMP1P23763 UBA52-202ENST00000442744 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VAMP1P23763 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.9□□□□□ -0.34
VAMP1P23763 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
VAMP1P23763 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.9□□□□□ -0.34
VAMP1P23763 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.9□□□□□ -0.34
VAMP1P23763 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
VAMP1P23763 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
VAMP1P23763 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VAMP1P23763 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
VAMP1P23763 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
VAMP1P23763 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VAMP1P23763 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VAMP1P23763 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
VAMP1P23763 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
VAMP1P23763 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
VAMP1P23763 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
VAMP1P23763 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.89□□□□□ -0.35
VAMP1P23763 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
VAMP1P23763 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
VAMP1P23763 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
VAMP1P23763 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.89□□□□□ -0.35
VAMP1P23763 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
VAMP1P23763 AC015802.1-201ENST00000588104 1449 ntBASIC12.89□□□□□ -0.35
VAMP1P23763 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
VAMP1P23763 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.89□□□□□ -0.35
VAMP1P23763 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.89□□□□□ -0.35
VAMP1P23763 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.89□□□□□ -0.35
VAMP1P23763 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
VAMP1P23763 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.89□□□□□ -0.35
VAMP1P23763 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
VAMP1P23763 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.89□□□□□ -0.35
VAMP1P23763 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.89□□□□□ -0.35
VAMP1P23763 AC108751.1-201ENST00000490852 363 ntBASIC12.89□□□□□ -0.35
VAMP1P23763 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.89□□□□□ -0.35
VAMP1P23763 AF238378.1-201ENST00000526806 358 ntBASIC12.89□□□□□ -0.35
VAMP1P23763 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC12.89□□□□□ -0.35
VAMP1P23763 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
VAMP1P23763 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.89□□□□□ -0.35
VAMP1P23763 AL358472.4-201ENST00000633140 710 ntBASIC12.89□□□□□ -0.35
VAMP1P23763 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
VAMP1P23763 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.89□□□□□ -0.35
VAMP1P23763 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.89□□□□□ -0.35
VAMP1P23763 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
VAMP1P23763 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.89□□□□□ -0.35
VAMP1P23763 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.89□□□□□ -0.35
VAMP1P23763 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.89□□□□□ -0.35
VAMP1P23763 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.89□□□□□ -0.35
VAMP1P23763 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
VAMP1P23763 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 COL6A4P2-202ENST00000504443 2753 ntBASIC12.89□□□□□ -0.35
VAMP1P23763 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.89□□□□□ -0.35
VAMP1P23763 CYP4F24P-201ENST00000586049 1580 ntBASIC12.89□□□□□ -0.35
VAMP1P23763 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.89□□□□□ -0.35
VAMP1P23763 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
VAMP1P23763 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 DNAL1-201ENST00000311089 2312 ntTSL 2 BASIC12.89□□□□□ -0.35
VAMP1P23763 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
VAMP1P23763 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
VAMP1P23763 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VAMP1P23763 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VAMP1P23763 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.88□□□□□ -0.35
VAMP1P23763 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
VAMP1P23763 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
VAMP1P23763 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VAMP1P23763 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VAMP1P23763 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VAMP1P23763 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VAMP1P23763 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VAMP1P23763 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms