Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PTPRAP18433 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPRAP18433 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPRAP18433 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPRAP18433 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPRAP18433 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPRAP18433 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPRAP18433 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPRAP18433 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPRAP18433 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PTPRAP18433 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPRAP18433 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPRAP18433 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPRAP18433 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPRAP18433 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPRAP18433 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPRAP18433 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PTPRAP18433 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 AC112693.3-201ENST00000624819 1983 ntBASIC17.28■□□□□ 0.36
PTPRAP18433 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPRAP18433 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 RPSAP31-201ENST00000416648 895 ntBASIC17.28■□□□□ 0.36
PTPRAP18433 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPRAP18433 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 AC026320.2-201ENST00000434379 478 ntBASIC17.28■□□□□ 0.36
PTPRAP18433 AC078991.1-201ENST00000437297 610 ntBASIC17.28■□□□□ 0.36
PTPRAP18433 AC008723.1-201ENST00000506922 207 ntBASIC17.28■□□□□ 0.36
PTPRAP18433 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PTPRAP18433 MIR6769A-201ENST00000617340 73 ntBASIC17.28■□□□□ 0.36
PTPRAP18433 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPRAP18433 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 AC013726.1-201ENST00000563747 2285 ntBASIC17.28■□□□□ 0.36
PTPRAP18433 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
PTPRAP18433 AC007292.2-201ENST00000593524 1812 ntBASIC17.28■□□□□ 0.36
PTPRAP18433 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPRAP18433 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PTPRAP18433 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPRAP18433 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPRAP18433 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPRAP18433 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPRAP18433 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPRAP18433 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPRAP18433 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPRAP18433 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPRAP18433 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPRAP18433 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPRAP18433 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPRAP18433 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPRAP18433 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPRAP18433 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPRAP18433 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPRAP18433 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PTPRAP18433 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PTPRAP18433 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.27■□□□□ 0.36
PTPRAP18433 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.27■□□□□ 0.36
PTPRAP18433 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPRAP18433 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPRAP18433 AC133540.1-201ENST00000620845 1019 ntBASIC17.27■□□□□ 0.36
PTPRAP18433 YRDCP1-201ENST00000621419 643 ntBASIC17.27■□□□□ 0.36
PTPRAP18433 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPRAP18433 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPRAP18433 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPRAP18433 C18orf15-201ENST00000623680 2534 ntBASIC17.27■□□□□ 0.36
PTPRAP18433 AC023024.2-201ENST00000623561 1993 ntBASIC17.27■□□□□ 0.36
PTPRAP18433 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPRAP18433 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.27■□□□□ 0.35
PTPRAP18433 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.27■□□□□ 0.35
PTPRAP18433 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPRAP18433 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.27■□□□□ 0.35
PTPRAP18433 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
PTPRAP18433 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PTPRAP18433 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PTPRAP18433 MROH4P-201ENST00000431302 1578 ntBASIC17.27■□□□□ 0.35
PTPRAP18433 CAP2P1-201ENST00000557743 1390 ntBASIC17.27■□□□□ 0.35
PTPRAP18433 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRAP18433 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRAP18433 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRAP18433 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRAP18433 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTPRAP18433 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPRAP18433 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRAP18433 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRAP18433 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRAP18433 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PTPRAP18433 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms