Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AC133539.2-201ENST00000604757 467 ntBASIC15.32■□□□□ 0.04
VCLP18206 MIR8072-201ENST00000614241 80 ntBASIC15.32■□□□□ 0.04
VCLP18206 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.32■□□□□ 0.04
VCLP18206 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VCLP18206 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VCLP18206 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VCLP18206 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
VCLP18206 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
VCLP18206 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VCLP18206 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VCLP18206 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.32■□□□□ 0.04
VCLP18206 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VCLP18206 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VCLP18206 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
VCLP18206 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.32■□□□□ 0.04
VCLP18206 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VCLP18206 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VCLP18206 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VCLP18206 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VCLP18206 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.31■□□□□ 0.04
VCLP18206 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.31■□□□□ 0.04
VCLP18206 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.31■□□□□ 0.04
VCLP18206 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.31■□□□□ 0.04
VCLP18206 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VCLP18206 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.31■□□□□ 0.04
VCLP18206 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VCLP18206 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 ELK1P1-201ENST00000485699 580 ntBASIC15.31■□□□□ 0.04
VCLP18206 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
VCLP18206 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.31■□□□□ 0.04
VCLP18206 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.31■□□□□ 0.04
VCLP18206 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.31■□□□□ 0.04
VCLP18206 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
VCLP18206 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.31■□□□□ 0.04
VCLP18206 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.31■□□□□ 0.04
VCLP18206 AL049840.4-201ENST00000602422 811 ntBASIC15.31■□□□□ 0.04
VCLP18206 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.31■□□□□ 0.04
VCLP18206 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.31■□□□□ 0.04
VCLP18206 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.31■□□□□ 0.04
VCLP18206 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.31■□□□□ 0.04
VCLP18206 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.31■□□□□ 0.04
VCLP18206 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.31■□□□□ 0.04
VCLP18206 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.31■□□□□ 0.04
VCLP18206 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VCLP18206 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.3■□□□□ 0.04
VCLP18206 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.3■□□□□ 0.04
VCLP18206 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.3■□□□□ 0.04
VCLP18206 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
VCLP18206 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
VCLP18206 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
VCLP18206 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.3■□□□□ 0.04
VCLP18206 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.3■□□□□ 0.04
VCLP18206 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.3■□□□□ 0.04
VCLP18206 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 SOCS2P1-201ENST00000417727 557 ntBASIC15.3■□□□□ 0.04
VCLP18206 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.3■□□□□ 0.04
VCLP18206 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.3■□□□□ 0.04
VCLP18206 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.3■□□□□ 0.04
VCLP18206 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VCLP18206 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.3■□□□□ 0.04
VCLP18206 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.3■□□□□ 0.04
VCLP18206 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms