Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CDRT1O95170 AC130686.1-201ENST00000622936 2466 ntBASIC13.59□□□□□ -0.23
CDRT1O95170 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.59□□□□□ -0.23
CDRT1O95170 ZNF259P1-201ENST00000407656 1365 ntBASIC13.59□□□□□ -0.23
CDRT1O95170 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CDRT1O95170 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.59□□□□□ -0.23
CDRT1O95170 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CDRT1O95170 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.59□□□□□ -0.23
CDRT1O95170 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.59□□□□□ -0.23
CDRT1O95170 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 TFAMP1-201ENST00000412727 736 ntBASIC13.59□□□□□ -0.23
CDRT1O95170 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.59□□□□□ -0.23
CDRT1O95170 EEF1DP4-201ENST00000446006 880 ntBASIC13.59□□□□□ -0.23
CDRT1O95170 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.59□□□□□ -0.23
CDRT1O95170 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.59□□□□□ -0.23
CDRT1O95170 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.59□□□□□ -0.23
CDRT1O95170 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.59□□□□□ -0.23
CDRT1O95170 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.59□□□□□ -0.23
CDRT1O95170 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.59□□□□□ -0.23
CDRT1O95170 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.59□□□□□ -0.23
CDRT1O95170 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.59□□□□□ -0.23
CDRT1O95170 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.59□□□□□ -0.23
CDRT1O95170 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 AC008267.7-201ENST00000624570 1194 ntBASIC13.59□□□□□ -0.23
CDRT1O95170 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CDRT1O95170 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CDRT1O95170 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.59□□□□□ -0.23
CDRT1O95170 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.59□□□□□ -0.23
CDRT1O95170 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CDRT1O95170 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CDRT1O95170 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CDRT1O95170 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CDRT1O95170 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.59□□□□□ -0.23
CDRT1O95170 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDRT1O95170 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CDRT1O95170 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CDRT1O95170 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CDRT1O95170 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CDRT1O95170 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.58□□□□□ -0.24
CDRT1O95170 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
CDRT1O95170 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CDRT1O95170 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.58□□□□□ -0.24
CDRT1O95170 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.58□□□□□ -0.24
CDRT1O95170 AL355306.1-201ENST00000415580 579 ntBASIC13.58□□□□□ -0.24
CDRT1O95170 AC136604.1-201ENST00000418535 575 ntBASIC13.58□□□□□ -0.24
CDRT1O95170 AC142381.1-201ENST00000426099 345 ntBASIC13.58□□□□□ -0.24
CDRT1O95170 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.58□□□□□ -0.24
CDRT1O95170 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.58□□□□□ -0.24
CDRT1O95170 TPT1P11-201ENST00000458482 498 ntBASIC13.58□□□□□ -0.24
CDRT1O95170 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.58□□□□□ -0.24
CDRT1O95170 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
CDRT1O95170 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.58□□□□□ -0.24
CDRT1O95170 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.58□□□□□ -0.24
CDRT1O95170 AC091812.2-201ENST00000619081 385 ntBASIC13.58□□□□□ -0.24
CDRT1O95170 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.58□□□□□ -0.24
CDRT1O95170 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.58□□□□□ -0.24
CDRT1O95170 DMBT1P1-203ENST00000636837 4628 ntBASIC13.58□□□□□ -0.24
CDRT1O95170 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.58□□□□□ -0.24
CDRT1O95170 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CDRT1O95170 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
CDRT1O95170 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CDRT1O95170 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
CDRT1O95170 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.58□□□□□ -0.24
CDRT1O95170 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms