Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 YBX1P6-201ENST00000442962 1002 ntBASIC13.59□□□□□ -0.23
ZIC3O60481 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.59□□□□□ -0.23
ZIC3O60481 COX5BP1-201ENST00000507622 393 ntBASIC13.59□□□□□ -0.23
ZIC3O60481 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.59□□□□□ -0.23
ZIC3O60481 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.59□□□□□ -0.23
ZIC3O60481 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.59□□□□□ -0.23
ZIC3O60481 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.59□□□□□ -0.23
ZIC3O60481 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.59□□□□□ -0.23
ZIC3O60481 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.59□□□□□ -0.23
ZIC3O60481 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.59□□□□□ -0.23
ZIC3O60481 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.59□□□□□ -0.23
ZIC3O60481 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.59□□□□□ -0.23
ZIC3O60481 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.59□□□□□ -0.23
ZIC3O60481 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ZIC3O60481 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 AL138725.1-201ENST00000407347 1314 ntBASIC13.59□□□□□ -0.23
ZIC3O60481 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.59□□□□□ -0.23
ZIC3O60481 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC3O60481 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
ZIC3O60481 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ZIC3O60481 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ZIC3O60481 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
ZIC3O60481 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ZIC3O60481 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ZIC3O60481 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.58□□□□□ -0.23
ZIC3O60481 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.58□□□□□ -0.23
ZIC3O60481 PKD1P5-201ENST00000532415 10291 ntBASIC13.58□□□□□ -0.24
ZIC3O60481 AP000593.2-201ENST00000542775 1433 ntBASIC13.58□□□□□ -0.24
ZIC3O60481 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.58□□□□□ -0.24
ZIC3O60481 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 RN7SKP230-201ENST00000365642 335 ntBASIC13.58□□□□□ -0.24
ZIC3O60481 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.58□□□□□ -0.24
ZIC3O60481 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ZIC3O60481 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.58□□□□□ -0.24
ZIC3O60481 CNN2P10-201ENST00000443067 918 ntBASIC13.58□□□□□ -0.24
ZIC3O60481 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 RN7SL713P-201ENST00000582127 302 ntBASIC13.58□□□□□ -0.24
ZIC3O60481 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.58□□□□□ -0.24
ZIC3O60481 AC073413.1-201ENST00000603927 732 ntBASIC13.58□□□□□ -0.24
ZIC3O60481 AC138696.2-201ENST00000607376 223 ntBASIC13.58□□□□□ -0.24
ZIC3O60481 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 AJ011931.1-201ENST00000618749 2492 ntBASIC13.58□□□□□ -0.24
ZIC3O60481 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.58□□□□□ -0.24
ZIC3O60481 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ZIC3O60481 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.58□□□□□ -0.24
ZIC3O60481 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.58□□□□□ -0.24
ZIC3O60481 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.58□□□□□ -0.24
ZIC3O60481 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZIC3O60481 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.58□□□□□ -0.24
ZIC3O60481 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.57□□□□□ -0.24
ZIC3O60481 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZIC3O60481 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.57□□□□□ -0.24
ZIC3O60481 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZIC3O60481 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ZIC3O60481 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms