Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CASQ2O14958 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CASQ2O14958 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CASQ2O14958 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC14.44□□□□□ -0.1
CASQ2O14958 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
CASQ2O14958 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CASQ2O14958 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.44□□□□□ -0.1
CASQ2O14958 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CASQ2O14958 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CASQ2O14958 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CASQ2O14958 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
CASQ2O14958 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CASQ2O14958 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.43□□□□□ -0.1
CASQ2O14958 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC14.43□□□□□ -0.1
CASQ2O14958 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CASQ2O14958 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CASQ2O14958 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CASQ2O14958 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.43□□□□□ -0.1
CASQ2O14958 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CASQ2O14958 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CASQ2O14958 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CASQ2O14958 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CASQ2O14958 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CASQ2O14958 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CASQ2O14958 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CASQ2O14958 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.43□□□□□ -0.1
CASQ2O14958 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
CASQ2O14958 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CASQ2O14958 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.43□□□□□ -0.1
CASQ2O14958 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.43□□□□□ -0.1
CASQ2O14958 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.43□□□□□ -0.1
CASQ2O14958 CXCL1P1-201ENST00000502804 216 ntBASIC14.43□□□□□ -0.1
CASQ2O14958 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.43□□□□□ -0.1
CASQ2O14958 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CASQ2O14958 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.43□□□□□ -0.1
CASQ2O14958 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.43□□□□□ -0.1
CASQ2O14958 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.43□□□□□ -0.1
CASQ2O14958 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC14.43□□□□□ -0.1
CASQ2O14958 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.43□□□□□ -0.1
CASQ2O14958 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CASQ2O14958 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CASQ2O14958 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CASQ2O14958 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CASQ2O14958 AL354702.1-201ENST00000442006 1960 ntBASIC14.43□□□□□ -0.1
CASQ2O14958 USO1-201ENST00000264904 4135 ntTSL 2 BASIC14.43□□□□□ -0.1
CASQ2O14958 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CASQ2O14958 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CASQ2O14958 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CASQ2O14958 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CASQ2O14958 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CASQ2O14958 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CASQ2O14958 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.43□□□□□ -0.1
CASQ2O14958 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CASQ2O14958 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CASQ2O14958 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.43□□□□□ -0.1
CASQ2O14958 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.43□□□□□ -0.1
CASQ2O14958 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.42□□□□□ -0.1
CASQ2O14958 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CASQ2O14958 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CASQ2O14958 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.42□□□□□ -0.1
CASQ2O14958 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CASQ2O14958 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CASQ2O14958 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CASQ2O14958 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.42□□□□□ -0.1
CASQ2O14958 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CASQ2O14958 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.42□□□□□ -0.1
CASQ2O14958 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CASQ2O14958 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CASQ2O14958 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CASQ2O14958 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CASQ2O14958 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CASQ2O14958 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CASQ2O14958 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CASQ2O14958 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CASQ2O14958 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.42□□□□□ -0.1
CASQ2O14958 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
CASQ2O14958 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.42□□□□□ -0.1
CASQ2O14958 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.42□□□□□ -0.1
CASQ2O14958 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.42□□□□□ -0.1
CASQ2O14958 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.42□□□□□ -0.1
CASQ2O14958 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CASQ2O14958 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.42□□□□□ -0.1
CASQ2O14958 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.42□□□□□ -0.1
CASQ2O14958 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.42□□□□□ -0.1
CASQ2O14958 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.42□□□□□ -0.1
CASQ2O14958 SPTSSB-204ENST00000617024 1292 ntBASIC14.42□□□□□ -0.1
CASQ2O14958 AC114271.1-201ENST00000612689 2813 ntBASIC14.42□□□□□ -0.1
CASQ2O14958 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CASQ2O14958 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.42□□□□□ -0.1
CASQ2O14958 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CASQ2O14958 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CASQ2O14958 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.42□□□□□ -0.1
CASQ2O14958 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CASQ2O14958 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CASQ2O14958 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CASQ2O14958 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CASQ2O14958 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CASQ2O14958 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CASQ2O14958 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CASQ2O14958 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms