Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF346Q9UL40 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF346Q9UL40 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF346Q9UL40 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF346Q9UL40 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF346Q9UL40 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF346Q9UL40 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF346Q9UL40 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF346Q9UL40 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF346Q9UL40 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF346Q9UL40 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF346Q9UL40 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF346Q9UL40 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.7□□□□□ -0.22
ZNF346Q9UL40 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ZNF346Q9UL40 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 AL360270.3-201ENST00000609118 1348 ntBASIC13.69□□□□□ -0.22
ZNF346Q9UL40 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 AC104794.3-201ENST00000566840 1248 ntBASIC13.69□□□□□ -0.22
ZNF346Q9UL40 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 DRD5P1-201ENST00000456605 1438 ntBASIC13.69□□□□□ -0.22
ZNF346Q9UL40 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF346Q9UL40 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 AL365209.1-201ENST00000624418 6473 ntBASIC13.68□□□□□ -0.22
ZNF346Q9UL40 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF346Q9UL40 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms