Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 AC073957.3-201ENST00000609998 6758 ntBASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 AC112191.1-201ENST00000523689 701 ntBASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
SND1-IT1Q9HBX3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 AC004899.2-201ENST00000622993 3860 ntBASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 CICP20-201ENST00000443330 2801 ntBASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 CICP8-201ENST00000455800 2813 ntBASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC10.22□□□□□ -0.77
SND1-IT1Q9HBX3 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms