Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 AP000845.1-201ENST00000581677 2131 ntBASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 AL023775.1-201ENST00000454907 1746 ntBASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 HTR5BP-201ENST00000430851 1154 ntBASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 HIST3H2BA-201ENST00000436555 524 ntBASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 FDX1P1-201ENST00000449115 551 ntBASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 BANF1P1-201ENST00000553684 263 ntBASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 MTND6P24-201ENST00000440466 518 ntBASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 MTDHP5-201ENST00000598980 586 ntBASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMSS1Q9BQ75 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms