Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 AC130686.1-201ENST00000622936 2466 ntBASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 MIR346-201ENST00000362234 95 ntBASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 HAUS4P1-201ENST00000406739 1145 ntBASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 AC004890.2-204ENST00000481968 304 ntBASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 AC018529.1-201ENST00000613063 361 ntBASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 AC009118.2-201ENST00000613275 655 ntBASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 AC068587.6-202ENST00000641839 5619 ntBASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 AC113367.3-201ENST00000508316 1912 ntBASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 AC126755.1-201ENST00000525846 6405 ntBASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 PIN1P1-201ENST00000412108 996 ntBASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 RN7SL692P-201ENST00000464677 288 ntBASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 AL662799.1-202ENST00000614205 422 ntBASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 AL590560.3-201ENST00000623350 461 ntBASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
FOXR1Q6PIV2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXR1Q6PIV2 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms