Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 MIR943-201ENST00000401286 94 ntBASIC15.55■□□□□ 0.08
CASC4Q6P4E1 AC092580.3-201ENST00000430932 139 ntBASIC15.55■□□□□ 0.08
CASC4Q6P4E1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 AC015911.4-201ENST00000588022 1070 ntBASIC15.55■□□□□ 0.08
CASC4Q6P4E1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 AL158211.3-201ENST00000607385 239 ntBASIC15.55■□□□□ 0.08
CASC4Q6P4E1 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 AC140479.7-201ENST00000636301 2332 ntBASIC15.55■□□□□ 0.08
CASC4Q6P4E1 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CASC4Q6P4E1 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 AC018529.2-202ENST00000611482 3087 ntBASIC15.54■□□□□ 0.08
CASC4Q6P4E1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 AC005912.2-201ENST00000619492 2400 ntBASIC15.54■□□□□ 0.08
CASC4Q6P4E1 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 AP001160.2-201ENST00000596071 487 ntBASIC15.54■□□□□ 0.08
CASC4Q6P4E1 AL844908.2-201ENST00000609461 460 ntBASIC15.54■□□□□ 0.08
CASC4Q6P4E1 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.54■□□□□ 0.08
CASC4Q6P4E1 AL590560.3-201ENST00000623350 461 ntBASIC15.54■□□□□ 0.08
CASC4Q6P4E1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 MTHFR-210ENST00000641407 2387 ntBASIC15.54■□□□□ 0.08
CASC4Q6P4E1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 AC131212.3-201ENST00000624087 4219 ntBASIC15.54■□□□□ 0.08
CASC4Q6P4E1 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CASC4Q6P4E1 AC005089.1-201ENST00000619486 2241 ntBASIC15.53■□□□□ 0.08
CASC4Q6P4E1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CASC4Q6P4E1 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CASC4Q6P4E1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CASC4Q6P4E1 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.53■□□□□ 0.08
CASC4Q6P4E1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.53■□□□□ 0.08
CASC4Q6P4E1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.53■□□□□ 0.08
CASC4Q6P4E1 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms