Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM3O75382 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM3O75382 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM3O75382 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM3O75382 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM3O75382 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM3O75382 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM3O75382 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM3O75382 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM3O75382 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM3O75382 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRIM3O75382 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRIM3O75382 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM3O75382 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.23□□□□□ -0.13
TRIM3O75382 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM3O75382 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.23□□□□□ -0.13
TRIM3O75382 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 KRT17P7-201ENST00000451704 1104 ntBASIC14.23□□□□□ -0.13
TRIM3O75382 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.23□□□□□ -0.13
TRIM3O75382 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.23□□□□□ -0.13
TRIM3O75382 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.23□□□□□ -0.13
TRIM3O75382 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.23□□□□□ -0.13
TRIM3O75382 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM3O75382 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM3O75382 AL049840.4-201ENST00000602422 811 ntBASIC14.23□□□□□ -0.13
TRIM3O75382 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRIM3O75382 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM3O75382 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRIM3O75382 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 AC138969.2-201ENST00000532739 9932 ntBASIC14.23□□□□□ -0.13
TRIM3O75382 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
TRIM3O75382 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM3O75382 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM3O75382 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRIM3O75382 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM3O75382 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM3O75382 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRIM3O75382 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
TRIM3O75382 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM3O75382 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM3O75382 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM3O75382 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM3O75382 AC090616.6-203ENST00000579186 1945 ntBASIC14.22□□□□□ -0.13
TRIM3O75382 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM3O75382 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 AL512384.1-201ENST00000406683 331 ntBASIC14.22□□□□□ -0.13
TRIM3O75382 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM3O75382 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIM3O75382 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIM3O75382 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM3O75382 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM3O75382 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
TRIM3O75382 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIM3O75382 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRIM3O75382 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM3O75382 IGHV3-72-202ENST00000621503 303 ntBASIC14.22□□□□□ -0.13
TRIM3O75382 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRIM3O75382 AL033527.5-201ENST00000641382 801 ntBASIC14.22□□□□□ -0.13
TRIM3O75382 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM3O75382 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRIM3O75382 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
TRIM3O75382 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM3O75382 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRIM3O75382 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms