Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TMX2-CTNND1H3BSU7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC069224.1-201ENST00000566372 1715 ntBASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC097359.3-201ENST00000603982 1210 ntBASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC005252.2-201ENST00000624630 1141 ntBASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.98□□□□□ -0.01
TMX2-CTNND1H3BSU7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC020658.6-201ENST00000623564 1870 ntBASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 MIR648-201ENST00000385046 94 ntBASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms