Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
YIPF1Q9Y548 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YIPF1Q9Y548 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YIPF1Q9Y548 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YIPF1Q9Y548 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.72■□□□□ 0.11
YIPF1Q9Y548 AC007950.2-201ENST00000615045 2347 ntBASIC15.72■□□□□ 0.11
YIPF1Q9Y548 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YIPF1Q9Y548 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YIPF1Q9Y548 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
YIPF1Q9Y548 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YIPF1Q9Y548 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
YIPF1Q9Y548 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 AC023090.2-201ENST00000625182 2110 ntBASIC15.71■□□□□ 0.11
YIPF1Q9Y548 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 AL662890.1-201ENST00000396818 632 ntBASIC15.71■□□□□ 0.11
YIPF1Q9Y548 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.71■□□□□ 0.11
YIPF1Q9Y548 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 DUX4L46-201ENST00000566845 751 ntBASIC15.71■□□□□ 0.11
YIPF1Q9Y548 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 AL645939.5-201ENST00000606834 243 ntBASIC15.71■□□□□ 0.11
YIPF1Q9Y548 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 AC004923.1-202ENST00000642106 209 ntBASIC15.71■□□□□ 0.11
YIPF1Q9Y548 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.71■□□□□ 0.11
YIPF1Q9Y548 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
YIPF1Q9Y548 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
YIPF1Q9Y548 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
YIPF1Q9Y548 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.71■□□□□ 0.1
YIPF1Q9Y548 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.71■□□□□ 0.1
YIPF1Q9Y548 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 MIR769-201ENST00000390225 118 ntBASIC15.7■□□□□ 0.1
YIPF1Q9Y548 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 TLE1P1-201ENST00000422965 589 ntBASIC15.7■□□□□ 0.1
YIPF1Q9Y548 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 AC106872.11-201ENST00000605838 421 ntBASIC15.7■□□□□ 0.1
YIPF1Q9Y548 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 AC004899.1-201ENST00000424687 1714 ntBASIC15.7■□□□□ 0.1
YIPF1Q9Y548 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms