Protein–RNA interactions for Protein: Q9NYL5

CYP39A1, 24-hydroxycholesterol 7-alpha-hydroxylase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP39A1Q9NYL5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CYP39A1Q9NYL5 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CYP39A1Q9NYL5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CYP39A1Q9NYL5 AC023024.2-201ENST00000623561 1993 ntBASIC17.11■□□□□ 0.33
CYP39A1Q9NYL5 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CYP39A1Q9NYL5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYP39A1Q9NYL5 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYP39A1Q9NYL5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CYP39A1Q9NYL5 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYP39A1Q9NYL5 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 DPM3-202ENST00000368399 517 ntBASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 RNMTL1P1-201ENST00000454103 560 ntBASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 SHC1P1-201ENST00000425230 1745 ntBASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYP39A1Q9NYL5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 SSR4P1-203ENST00000599569 2260 ntBASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 AC010141.1-201ENST00000411585 623 ntBASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 AC005740.2-201ENST00000511085 419 ntBASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 MIR3619-201ENST00000579667 83 ntBASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 AC126365.1-201ENST00000578585 1514 ntBASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP39A1Q9NYL5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CYP39A1Q9NYL5 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CYP39A1Q9NYL5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CYP39A1Q9NYL5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.08■□□□□ 0.33
CYP39A1Q9NYL5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CYP39A1Q9NYL5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CYP39A1Q9NYL5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CYP39A1Q9NYL5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CYP39A1Q9NYL5 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CYP39A1Q9NYL5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.08■□□□□ 0.33
CYP39A1Q9NYL5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CYP39A1Q9NYL5 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms