Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 FAM86LP-201ENST00000478302 853 ntBASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 AC026410.3-201ENST00000514280 936 ntBASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 AL157414.3-201ENST00000624276 1954 ntBASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.42□□□□□ -0.1
BHLHE41Q9C0J9 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
BHLHE41Q9C0J9 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 AL138799.1-201ENST00000448213 1675 ntBASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.4□□□□□ -0.1
BHLHE41Q9C0J9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms