Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 AC114501.2-201ENST00000439631 535 ntBASIC15.32■□□□□ 0.04
NDNQ99608 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.32■□□□□ 0.04
NDNQ99608 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.32■□□□□ 0.04
NDNQ99608 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.32■□□□□ 0.04
NDNQ99608 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.32■□□□□ 0.04
NDNQ99608 AC008738.7-201ENST00000609744 511 ntBASIC15.32■□□□□ 0.04
NDNQ99608 AL158212.4-201ENST00000624062 1286 ntBASIC15.32■□□□□ 0.04
NDNQ99608 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDNQ99608 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDNQ99608 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDNQ99608 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NDNQ99608 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDNQ99608 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDNQ99608 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDNQ99608 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDNQ99608 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NDNQ99608 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDNQ99608 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NDNQ99608 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.32■□□□□ 0.04
NDNQ99608 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NDNQ99608 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NDNQ99608 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.32■□□□□ 0.04
NDNQ99608 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
NDNQ99608 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDNQ99608 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDNQ99608 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDNQ99608 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDNQ99608 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.32■□□□□ 0.04
NDNQ99608 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDNQ99608 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NDNQ99608 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 COL6A4P2-202ENST00000504443 2753 ntBASIC15.31■□□□□ 0.04
NDNQ99608 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.31■□□□□ 0.04
NDNQ99608 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.31■□□□□ 0.04
NDNQ99608 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NDNQ99608 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.31■□□□□ 0.04
NDNQ99608 FAM8A3P-201ENST00000427218 844 ntBASIC15.31■□□□□ 0.04
NDNQ99608 AC055876.3-201ENST00000431496 288 ntBASIC15.31■□□□□ 0.04
NDNQ99608 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.31■□□□□ 0.04
NDNQ99608 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.31■□□□□ 0.04
NDNQ99608 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.31■□□□□ 0.04
NDNQ99608 AC138649.4-201ENST00000612222 287 ntBASIC15.31■□□□□ 0.04
NDNQ99608 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.31■□□□□ 0.04
NDNQ99608 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NDNQ99608 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
NDNQ99608 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.31■□□□□ 0.04
NDNQ99608 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.31■□□□□ 0.04
NDNQ99608 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.31■□□□□ 0.04
NDNQ99608 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NDNQ99608 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.31■□□□□ 0.04
NDNQ99608 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDNQ99608 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.31■□□□□ 0.04
NDNQ99608 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NDNQ99608 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.31■□□□□ 0.04
NDNQ99608 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.3■□□□□ 0.04
NDNQ99608 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
NDNQ99608 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.3■□□□□ 0.04
NDNQ99608 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.3■□□□□ 0.04
NDNQ99608 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.3■□□□□ 0.04
NDNQ99608 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.3■□□□□ 0.04
NDNQ99608 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.3■□□□□ 0.04
NDNQ99608 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.3■□□□□ 0.04
NDNQ99608 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.3■□□□□ 0.04
NDNQ99608 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.3■□□□□ 0.04
NDNQ99608 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.3■□□□□ 0.04
NDNQ99608 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.3■□□□□ 0.04
NDNQ99608 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.3■□□□□ 0.04
NDNQ99608 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms