Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.3■□□□□ 0.04
NOTCH4Q99466 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
NOTCH4Q99466 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NOTCH4Q99466 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.3■□□□□ 0.04
NOTCH4Q99466 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.3■□□□□ 0.04
NOTCH4Q99466 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.3■□□□□ 0.04
NOTCH4Q99466 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.3■□□□□ 0.04
NOTCH4Q99466 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.3■□□□□ 0.04
NOTCH4Q99466 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.3■□□□□ 0.04
NOTCH4Q99466 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.3■□□□□ 0.04
NOTCH4Q99466 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.3■□□□□ 0.04
NOTCH4Q99466 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
NOTCH4Q99466 COX6A1P2-201ENST00000620597 330 ntBASIC15.3■□□□□ 0.04
NOTCH4Q99466 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.3■□□□□ 0.04
NOTCH4Q99466 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.3■□□□□ 0.04
NOTCH4Q99466 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NOTCH4Q99466 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.3■□□□□ 0.04
NOTCH4Q99466 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 FAM90A2P-201ENST00000511144 1395 ntBASIC15.3■□□□□ 0.04
NOTCH4Q99466 FAM90A25P-201ENST00000528404 1395 ntBASIC15.3■□□□□ 0.04
NOTCH4Q99466 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NOTCH4Q99466 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
NOTCH4Q99466 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NOTCH4Q99466 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NOTCH4Q99466 FTH1P22-201ENST00000456305 520 ntBASIC15.29■□□□□ 0.04
NOTCH4Q99466 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 MRPL22P1-201ENST00000505398 616 ntBASIC15.29■□□□□ 0.04
NOTCH4Q99466 AC007881.3-201ENST00000608897 607 ntBASIC15.29■□□□□ 0.04
NOTCH4Q99466 MIR6842-201ENST00000612539 65 ntBASIC15.29■□□□□ 0.04
NOTCH4Q99466 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NOTCH4Q99466 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NOTCH4Q99466 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NOTCH4Q99466 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 WASH3P-207ENST00000560956 1394 ntBASIC15.29■□□□□ 0.04
NOTCH4Q99466 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 CICP23-201ENST00000605013 2741 ntBASIC15.29■□□□□ 0.04
NOTCH4Q99466 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NOTCH4Q99466 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NOTCH4Q99466 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NOTCH4Q99466 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 AC239868.1-201ENST00000369385 493 ntBASIC15.29■□□□□ 0.04
NOTCH4Q99466 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 AL355334.1-201ENST00000417713 215 ntBASIC15.29■□□□□ 0.04
NOTCH4Q99466 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NOTCH4Q99466 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 POU5F1P2-201ENST00000521750 823 ntBASIC15.29■□□□□ 0.04
NOTCH4Q99466 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 AC005618.3-201ENST00000624928 458 ntBASIC15.29■□□□□ 0.04
NOTCH4Q99466 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NOTCH4Q99466 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NOTCH4Q99466 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NOTCH4Q99466 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NOTCH4Q99466 FRMPD2B-201ENST00000431305 1347 ntBASIC15.29■□□□□ 0.04
NOTCH4Q99466 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NOTCH4Q99466 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.29■□□□□ 0.04
NOTCH4Q99466 AC011270.2-201ENST00000624293 2550 ntBASIC15.29■□□□□ 0.04
NOTCH4Q99466 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NOTCH4Q99466 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NOTCH4Q99466 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.28■□□□□ 0.04
NOTCH4Q99466 LINC01101-201ENST00000622953 1884 ntBASIC15.28■□□□□ 0.04
NOTCH4Q99466 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NOTCH4Q99466 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NOTCH4Q99466 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NOTCH4Q99466 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms