Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.87□□□□□ -0.35
RTN4IP1Q8WWV3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
RTN4IP1Q8WWV3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTN4IP1Q8WWV3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTN4IP1Q8WWV3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTN4IP1Q8WWV3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.87□□□□□ -0.35
RTN4IP1Q8WWV3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RTN4IP1Q8WWV3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
RTN4IP1Q8WWV3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTN4IP1Q8WWV3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTN4IP1Q8WWV3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTN4IP1Q8WWV3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTN4IP1Q8WWV3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTN4IP1Q8WWV3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
RTN4IP1Q8WWV3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RTN4IP1Q8WWV3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RTN4IP1Q8WWV3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RTN4IP1Q8WWV3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 HSPA7-201ENST00000445535 1927 ntBASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 AC113367.3-201ENST00000508316 1912 ntBASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 AC107890.1-201ENST00000422478 521 ntBASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 GHSR-202ENST00000427970 912 ntBASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 HIST3H2BA-201ENST00000436555 524 ntBASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 METTL21AP1-201ENST00000438852 635 ntBASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 HLA-V-204ENST00000476601 1289 ntBASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 AC069120.2-201ENST00000524091 540 ntBASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 AC051619.7-201ENST00000568314 623 ntBASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 MIR6069-201ENST00000620069 79 ntBASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 AP000845.1-201ENST00000581677 2131 ntBASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 AC097359.2-201ENST00000604992 2389 ntBASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTN4IP1Q8WWV3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms