Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CLDN8P56748 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN8P56748 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN8P56748 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLDN8P56748 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLDN8P56748 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLDN8P56748 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLDN8P56748 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CLDN8P56748 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN8P56748 AC055811.4-201ENST00000624039 1754 ntBASIC14.45□□□□□ -0.1
CLDN8P56748 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLDN8P56748 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN8P56748 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN8P56748 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN8P56748 FAM86LP-201ENST00000478302 853 ntBASIC14.45□□□□□ -0.1
CLDN8P56748 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLDN8P56748 SPDYE18-201ENST00000510091 1050 ntBASIC14.45□□□□□ -0.1
CLDN8P56748 IGHV3-42-201ENST00000520410 361 ntBASIC14.45□□□□□ -0.1
CLDN8P56748 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.45□□□□□ -0.1
CLDN8P56748 AC135586.1-201ENST00000539323 574 ntBASIC14.45□□□□□ -0.1
CLDN8P56748 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN8P56748 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN8P56748 AC107373.2-201ENST00000607735 490 ntBASIC14.45□□□□□ -0.1
CLDN8P56748 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CLDN8P56748 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CLDN8P56748 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN8P56748 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN8P56748 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLDN8P56748 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN8P56748 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN8P56748 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CLDN8P56748 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 AC097376.2-205ENST00000610159 5334 ntBASIC14.44□□□□□ -0.1
CLDN8P56748 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
CLDN8P56748 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.44□□□□□ -0.1
CLDN8P56748 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN8P56748 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN8P56748 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN8P56748 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN8P56748 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.44□□□□□ -0.1
CLDN8P56748 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN8P56748 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN8P56748 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.44□□□□□ -0.1
CLDN8P56748 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.44□□□□□ -0.1
CLDN8P56748 AC036164.1-201ENST00000570544 333 ntBASIC14.44□□□□□ -0.1
CLDN8P56748 AP001160.2-201ENST00000596071 487 ntBASIC14.44□□□□□ -0.1
CLDN8P56748 AC008738.7-201ENST00000609744 511 ntBASIC14.44□□□□□ -0.1
CLDN8P56748 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN8P56748 AC004840.1-201ENST00000636359 365 ntBASIC14.44□□□□□ -0.1
CLDN8P56748 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLDN8P56748 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN8P56748 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN8P56748 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms