Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMLP26374 MSTO2P-201ENST00000314835 1709 ntBASIC18.26■□□□□ 0.51
CHMLP26374 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CHMLP26374 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CHMLP26374 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMLP26374 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMLP26374 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMLP26374 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMLP26374 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMLP26374 BX640514.1-201ENST00000583223 1918 ntBASIC18.26■□□□□ 0.51
CHMLP26374 ACTBP8-201ENST00000403258 1108 ntBASIC18.26■□□□□ 0.51
CHMLP26374 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.26■□□□□ 0.51
CHMLP26374 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CHMLP26374 AP001063.1-201ENST00000568332 529 ntBASIC18.26■□□□□ 0.51
CHMLP26374 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.26■□□□□ 0.51
CHMLP26374 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMLP26374 AC004466.1-201ENST00000599515 1080 ntBASIC18.26■□□□□ 0.51
CHMLP26374 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.26■□□□□ 0.51
CHMLP26374 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.26■□□□□ 0.51
CHMLP26374 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMLP26374 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMLP26374 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
CHMLP26374 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMLP26374 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CHMLP26374 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMLP26374 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
CHMLP26374 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMLP26374 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMLP26374 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CHMLP26374 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMLP26374 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMLP26374 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMLP26374 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMLP26374 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMLP26374 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 AL354702.1-201ENST00000442006 1960 ntBASIC18.25■□□□□ 0.51
CHMLP26374 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CHMLP26374 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMLP26374 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMLP26374 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.25■□□□□ 0.51
CHMLP26374 HMGN1P19-201ENST00000436976 333 ntBASIC18.25■□□□□ 0.51
CHMLP26374 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 AC022137.2-201ENST00000503482 481 ntBASIC18.25■□□□□ 0.51
CHMLP26374 TERF1P3-201ENST00000505638 1227 ntBASIC18.25■□□□□ 0.51
CHMLP26374 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMLP26374 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMLP26374 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.25■□□□□ 0.51
CHMLP26374 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.25■□□□□ 0.51
CHMLP26374 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CHMLP26374 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMLP26374 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CHMLP26374 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMLP26374 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMLP26374 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMLP26374 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMLP26374 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMLP26374 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMLP26374 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMLP26374 MPI-203ENST00000535694 1523 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMLP26374 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMLP26374 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMLP26374 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMLP26374 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMLP26374 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHMLP26374 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CHMLP26374 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMLP26374 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.24■□□□□ 0.51
CHMLP26374 AL162726.2-201ENST00000438986 1017 ntBASIC18.24■□□□□ 0.51
CHMLP26374 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.24■□□□□ 0.51
CHMLP26374 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMLP26374 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMLP26374 AL603764.1-201ENST00000636452 321 ntBASIC18.24■□□□□ 0.51
CHMLP26374 AL033527.5-201ENST00000641382 801 ntBASIC18.24■□□□□ 0.51
CHMLP26374 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHMLP26374 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.24■□□□□ 0.51
CHMLP26374 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMLP26374 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms