Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT4P19013 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.3■□□□□ 0.04
KRT4P19013 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT4P19013 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT4P19013 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT4P19013 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
KRT4P19013 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.3■□□□□ 0.04
KRT4P19013 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT4P19013 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
KRT4P19013 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT4P19013 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.3■□□□□ 0.04
KRT4P19013 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT4P19013 Z97205.2-201ENST00000564697 1639 ntBASIC15.3■□□□□ 0.04
KRT4P19013 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
KRT4P19013 AL359881.3-201ENST00000602640 1721 ntBASIC15.3■□□□□ 0.04
KRT4P19013 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT4P19013 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 C20orf181-201ENST00000623918 480 ntBASIC15.3■□□□□ 0.04
KRT4P19013 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT4P19013 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT4P19013 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT4P19013 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT4P19013 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 MBLAC2-202ENST00000514906 1936 ntBASIC15.29■□□□□ 0.04
KRT4P19013 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT4P19013 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT4P19013 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
KRT4P19013 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KRT4P19013 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KRT4P19013 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
KRT4P19013 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KRT4P19013 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
KRT4P19013 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 TPM4P1-201ENST00000436100 807 ntBASIC15.29■□□□□ 0.04
KRT4P19013 TPT1P11-201ENST00000458482 498 ntBASIC15.29■□□□□ 0.04
KRT4P19013 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT4P19013 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT4P19013 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT4P19013 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.29■□□□□ 0.04
KRT4P19013 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT4P19013 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT4P19013 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT4P19013 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
KRT4P19013 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.29■□□□□ 0.04
KRT4P19013 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KRT4P19013 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
KRT4P19013 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
KRT4P19013 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT4P19013 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
KRT4P19013 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
KRT4P19013 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
KRT4P19013 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT4P19013 AC011474.4-201ENST00000623523 2076 ntBASIC15.29■□□□□ 0.04
KRT4P19013 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KRT4P19013 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT4P19013 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KRT4P19013 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT4P19013 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT4P19013 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
KRT4P19013 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KRT4P19013 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT4P19013 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KRT4P19013 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT4P19013 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT4P19013 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms