Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGA1P17096 ACE3P-201ENST00000423435 1973 ntBASIC15.57■□□□□ 0.08
HMGA1P17096 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA1P17096 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
HMGA1P17096 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA1P17096 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGA1P17096 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGA1P17096 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA1P17096 SPTLC1P5-201ENST00000450718 252 ntBASIC15.57■□□□□ 0.08
HMGA1P17096 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA1P17096 RPL18P13-201ENST00000478088 569 ntBASIC15.57■□□□□ 0.08
HMGA1P17096 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.57■□□□□ 0.08
HMGA1P17096 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HMGA1P17096 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA1P17096 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGA1P17096 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGA1P17096 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGA1P17096 AC013355.1-201ENST00000562625 723 ntBASIC15.57■□□□□ 0.08
HMGA1P17096 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HMGA1P17096 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
HMGA1P17096 AC084346.2-201ENST00000607097 949 ntBASIC15.57■□□□□ 0.08
HMGA1P17096 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA1P17096 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGA1P17096 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.57■□□□□ 0.08
HMGA1P17096 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA1P17096 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGA1P17096 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.57■□□□□ 0.08
HMGA1P17096 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
HMGA1P17096 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
HMGA1P17096 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGA1P17096 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.57■□□□□ 0.08
HMGA1P17096 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
HMGA1P17096 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HMGA1P17096 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
HMGA1P17096 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HMGA1P17096 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.57■□□□□ 0.08
HMGA1P17096 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGA1P17096 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGA1P17096 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.56■□□□□ 0.08
HMGA1P17096 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
HMGA1P17096 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 AC091951.1-201ENST00000512854 2465 ntBASIC15.56■□□□□ 0.08
HMGA1P17096 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
HMGA1P17096 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HMGA1P17096 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
HMGA1P17096 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGA1P17096 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
HMGA1P17096 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.56■□□□□ 0.08
HMGA1P17096 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.56■□□□□ 0.08
HMGA1P17096 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HMGA1P17096 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGA1P17096 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGA1P17096 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HMGA1P17096 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGA1P17096 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 AC007292.2-201ENST00000593524 1812 ntBASIC15.56■□□□□ 0.08
HMGA1P17096 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGA1P17096 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HMGA1P17096 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
HMGA1P17096 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.56■□□□□ 0.08
HMGA1P17096 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 CROCCP1-201ENST00000426910 5675 ntBASIC15.56■□□□□ 0.08
HMGA1P17096 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA1P17096 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.55■□□□□ 0.08
HMGA1P17096 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
HMGA1P17096 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA1P17096 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA1P17096 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA1P17096 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA1P17096 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGA1P17096 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA1P17096 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGA1P17096 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
HMGA1P17096 ZBED1P1-201ENST00000502364 1930 ntBASIC15.55■□□□□ 0.08
HMGA1P17096 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGA1P17096 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.55■□□□□ 0.08
HMGA1P17096 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HMGA1P17096 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA1P17096 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HMGA1P17096 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms