Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.73■□□□□ 0.11
CD48P09326 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
CD48P09326 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CD48P09326 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CD48P09326 AL139094.1-201ENST00000405549 1188 ntBASIC15.73■□□□□ 0.11
CD48P09326 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.73■□□□□ 0.11
CD48P09326 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.73■□□□□ 0.11
CD48P09326 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.73■□□□□ 0.11
CD48P09326 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.73■□□□□ 0.11
CD48P09326 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.73■□□□□ 0.11
CD48P09326 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.73■□□□□ 0.11
CD48P09326 AC190387.1-201ENST00000551683 408 ntBASIC15.73■□□□□ 0.11
CD48P09326 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.73■□□□□ 0.11
CD48P09326 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.73■□□□□ 0.11
CD48P09326 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.73■□□□□ 0.11
CD48P09326 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CD48P09326 AC005252.2-201ENST00000624630 1141 ntBASIC15.73■□□□□ 0.11
CD48P09326 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.73■□□□□ 0.11
CD48P09326 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CD48P09326 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.73■□□□□ 0.11
CD48P09326 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD48P09326 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CD48P09326 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD48P09326 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.72■□□□□ 0.11
CD48P09326 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.72■□□□□ 0.11
CD48P09326 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD48P09326 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CD48P09326 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CD48P09326 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CD48P09326 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD48P09326 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.72■□□□□ 0.11
CD48P09326 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CD48P09326 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD48P09326 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD48P09326 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.72■□□□□ 0.11
CD48P09326 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD48P09326 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.72■□□□□ 0.11
CD48P09326 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD48P09326 AC087499.6-201ENST00000411576 835 ntBASIC15.72■□□□□ 0.11
CD48P09326 SOCS2P1-201ENST00000417727 557 ntBASIC15.72■□□□□ 0.11
CD48P09326 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CD48P09326 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.72■□□□□ 0.11
CD48P09326 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CD48P09326 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.72■□□□□ 0.11
CD48P09326 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.72■□□□□ 0.11
CD48P09326 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CD48P09326 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.72■□□□□ 0.11
CD48P09326 WFDC1-204ENST00000613603 549 ntBASIC15.72■□□□□ 0.11
CD48P09326 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD48P09326 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.72■□□□□ 0.11
CD48P09326 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.72■□□□□ 0.11
CD48P09326 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CD48P09326 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD48P09326 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CD48P09326 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.72■□□□□ 0.11
CD48P09326 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.72■□□□□ 0.11
CD48P09326 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.72■□□□□ 0.11
CD48P09326 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CD48P09326 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD48P09326 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD48P09326 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD48P09326 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD48P09326 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD48P09326 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.71■□□□□ 0.11
CD48P09326 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD48P09326 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.71■□□□□ 0.11
CD48P09326 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.71■□□□□ 0.11
CD48P09326 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.71■□□□□ 0.11
CD48P09326 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD48P09326 KRT8P14-201ENST00000414254 1442 ntBASIC15.71■□□□□ 0.11
CD48P09326 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CD48P09326 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD48P09326 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD48P09326 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.71■□□□□ 0.11
CD48P09326 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CD48P09326 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.71■□□□□ 0.11
CD48P09326 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD48P09326 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms