Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.83□□□□□ -0.03
PCDHGB4Q9UN71 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGB4Q9UN71 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGB4Q9UN71 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGB4Q9UN71 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGB4Q9UN71 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGB4Q9UN71 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
PCDHGB4Q9UN71 AL359183.1-201ENST00000623796 2132 ntBASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 SPDYE17-201ENST00000412399 783 ntBASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 FAM58DP-201ENST00000428076 619 ntBASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 AC007967.4-201ENST00000614700 386 ntBASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 BEND3P1-201ENST00000421591 1944 ntBASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 AC126335.2-201ENST00000623362 4637 ntBASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGB4Q9UN71 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 SPDYE7P-202ENST00000420373 878 ntBASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 YBX1P5-201ENST00000509441 847 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms