Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC092123.2-201ENST00000611189 5421 ntBASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 TMCC2-208ENST00000545499 3339 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 PTCHD3P2-201ENST00000424937 1205 ntBASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 AC009955.4-201ENST00000597192 544 ntBASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 AC136469.2-201ENST00000623944 1028 ntBASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 PLA2G6-203ENST00000402064 3011 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 RHBDD1-201ENST00000341329 4883 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 RNF13-201ENST00000344229 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 CARS-214ENST00000529772 2637 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 GABBR1-201ENST00000355973 3506 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 AP001993.1-201ENST00000527317 2337 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 USP31-201ENST00000219689 10699 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 TTC8-205ENST00000358622 2297 ntTSL 5 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 PLEKHG5-203ENST00000377728 3613 ntAPPRIS P3 TSL 2 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 AL391294.1-201ENST00000641352 4068 ntBASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 KDM8-201ENST00000286096 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 CDRT4-204ENST00000619038 2498 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 RIMKLA-202ENST00000431473 8909 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 LINC01634-201ENST00000443243 2379 ntTSL 2 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 ZNF300-203ENST00000418587 3226 ntTSL 2 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 DNAJA4-201ENST00000343789 2961 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 PDXK-209ENST00000467908 7194 ntTSL 3 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 VPS39-201ENST00000318006 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms