RNA–Protein interactions for RNA: ENST00000527317.2

AP001993.1-201, humanhuman

TSL 2 BASIC

Gene AP001993.1, Length 2,337 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001993.1-201ENST00000527317 PELP1Q8IZL8 1130 aaKnown RBP19.97■□□□□ 0.79
AP001993.1-201ENST00000527317 MYT1Q01538 1121 aa19.58■□□□□ 0.73
AP001993.1-201ENST00000527317 TTBK1Q5TCY1 1321 aaPredicted RBP18.81■□□□□ 0.6
AP001993.1-201ENST00000527317 HRCP23327 699 aa18.78■□□□□ 0.6
AP001993.1-201ENST00000527317 PRKCSHP14314 528 aaPredicted RBP18.45■□□□□ 0.54
AP001993.1-201ENST00000527317 SCAF1Q9H7N4 1312 aaKnown RBP18.44■□□□□ 0.54
AP001993.1-201ENST00000527317 PPARGC1BQ86YN6 1023 aaKnown RBP18.27■□□□□ 0.51
AP001993.1-201ENST00000527317 BCL11AQ9H165 835 aa18.12■□□□□ 0.49
AP001993.1-201ENST00000527317 APLP2Q06481 763 aa17.96■□□□□ 0.47
AP001993.1-201ENST00000527317 ERICH6Q7L0X2 663 aa17.95■□□□□ 0.46
AP001993.1-201ENST00000527317 FAM9AQ8IZU1 332 aaPredicted RBP17.94■□□□□ 0.46
AP001993.1-201ENST00000527317 PCGF6Q9BYE7 350 aa17.71■□□□□ 0.43
AP001993.1-201ENST00000527317 CENPBP07199 599 aaPredicted RBP17.64■□□□□ 0.41
AP001993.1-201ENST00000527317 ACIN1Q9UKV3 1341 aaKnown RBP17.59■□□□□ 0.41
AP001993.1-201ENST00000527317 SLC24A1O60721 1099 aa17.5■□□□□ 0.39
AP001993.1-201ENST00000527317 GTF3C3Q9Y5Q9 886 aa17.49■□□□□ 0.39
AP001993.1-201ENST00000527317 NEUROD1Q13562 356 aa17.47■□□□□ 0.39
AP001993.1-201ENST00000527317 ANP32EQ9BTT0 268 aa17.3■□□□□ 0.36
AP001993.1-201ENST00000527317 MYO15BQ96JP2 1530 aa17.29■□□□□ 0.36
AP001993.1-201ENST00000527317 ZEB1P37275 1124 aaPredicted RBP17.25■□□□□ 0.35
AP001993.1-201ENST00000527317 CSRNP3Q8WYN3 585 aa17.14■□□□□ 0.33
AP001993.1-201ENST00000527317 CCDC180Q9P1Z9 1646 aa16.98■□□□□ 0.31
AP001993.1-201ENST00000527317 DAXXQ9UER7 740 aaPredicted RBP16.93■□□□□ 0.3
AP001993.1-201ENST00000527317 DCAF1Q9Y4B6 1507 aa16.93■□□□□ 0.3
AP001993.1-201ENST00000527317 EIF5BO60841 1220 aaKnown RBP16.87■□□□□ 0.29
AP001993.1-201ENST00000527317 TRIM26Q12899 539 aaPredicted RBP16.86■□□□□ 0.29
AP001993.1-201ENST00000527317 ANO8Q9HCE9 1232 aaPredicted RBP16.84■□□□□ 0.29
AP001993.1-201ENST00000527317 NISCHQ9Y2I1 1504 aa16.81■□□□□ 0.28
AP001993.1-201ENST00000527317 UBE2Q2Q8WVN8 375 aa16.78■□□□□ 0.28
AP001993.1-201ENST00000527317 TSHZ2Q9NRE2 1034 aa16.65■□□□□ 0.26
AP001993.1-201ENST00000527317 DIEXFQ68CQ4 756 aaKnown RBP16.59■□□□□ 0.25
AP001993.1-201ENST00000527317 PLEKHG5O94827 1062 aa16.57■□□□□ 0.24
AP001993.1-201ENST00000527317 SALL2Q9Y467 1007 aaPredicted RBP16.48■□□□□ 0.23
AP001993.1-201ENST00000527317 CHIC1Q5VXU3 224 aa16.46■□□□□ 0.23
AP001993.1-201ENST00000527317 CCDC136Q96JN2 1154 aa16.4■□□□□ 0.22
AP001993.1-201ENST00000527317 YTHDC1Q96MU7 727 aaKnown RBP16.4■□□□□ 0.22
AP001993.1-201ENST00000527317 PKNOX2Q96KN3 472 aa16.38■□□□□ 0.21
AP001993.1-201ENST00000527317 SUPT16HQ9Y5B9 1047 aaKnown RBP16.38■□□□□ 0.21
AP001993.1-201ENST00000527317 CLSPNQ9HAW4 1339 aa16.35■□□□□ 0.21
AP001993.1-201ENST00000527317 PODXL2Q9NZ53 605 aa16.34■□□□□ 0.21
AP001993.1-201ENST00000527317 ERICH6BQ5W0A0 696 aa16.31■□□□□ 0.2
AP001993.1-201ENST00000527317 TRIM41Q8WV44 630 aa16.23■□□□□ 0.19
AP001993.1-201ENST00000527317 SUPT5HO00267 1087 aaKnown RBP16.21■□□□□ 0.19
AP001993.1-201ENST00000527317 MYT1LQ9UL68 1186 aa16.21■□□□□ 0.19
AP001993.1-201ENST00000527317 DEKP35659 375 aaKnown RBP16.18■□□□□ 0.18
AP001993.1-201ENST00000527317 LOC105371045A0A1W2PR82 267 aa16.17■□□□□ 0.18
AP001993.1-201ENST00000527317 MSH5O43196 834 aa16.14■□□□□ 0.17
AP001993.1-201ENST00000527317 RBM19Q9Y4C8 960 aaKnown RBP16.12■□□□□ 0.17
AP001993.1-201ENST00000527317 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.11■□□□□ 0.17
AP001993.1-201ENST00000527317 MIER1Q8N108 512 aa16.05■□□□□ 0.16
AP001993.1-201ENST00000527317 ZNF316A6NFI3 1004 aaPredicted RBP15.99■□□□□ 0.15
AP001993.1-201ENST00000527317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.97■□□□□ 0.15
AP001993.1-201ENST00000527317 CCER1Q8TC90 406 aaPredicted RBP15.97■□□□□ 0.15
AP001993.1-201ENST00000527317 IL27Q8NEV9 243 aa15.89■□□□□ 0.13
AP001993.1-201ENST00000527317 FANCIQ9NVI1 1328 aa15.88■□□□□ 0.13
AP001993.1-201ENST00000527317 NEFLP07196 543 aa15.84■□□□□ 0.13
AP001993.1-201ENST00000527317 RTN4Q9NQC3 1192 aaKnown RBP15.83■□□□□ 0.12
AP001993.1-201ENST00000527317 SHROOM4Q9ULL8 1493 aa15.79■□□□□ 0.12
AP001993.1-201ENST00000527317 BCANQ96GW7 911 aa15.76■□□□□ 0.11
AP001993.1-201ENST00000527317 ZMYND15Q9H091 742 aa15.74■□□□□ 0.11
AP001993.1-201ENST00000527317 PDE4CQ08493 712 aa15.71■□□□□ 0.1
AP001993.1-201ENST00000527317 PDIA4P13667 645 aaKnown RBP15.66■□□□□ 0.1
AP001993.1-201ENST00000527317 FGD1P98174 961 aa15.66■□□□□ 0.1
AP001993.1-201ENST00000527317 GLIPR1L2Q4G1C9 344 aa15.66■□□□□ 0.1
AP001993.1-201ENST00000527317 FKBP8Q14318 412 aa15.62■□□□□ 0.09
AP001993.1-201ENST00000527317 A0A0U1RQG5 324 aaPredicted RBP15.6■□□□□ 0.09
AP001993.1-201ENST00000527317 VSIG10Q8N0Z9 540 aa15.6■□□□□ 0.09
AP001993.1-201ENST00000527317 NBR1Q14596 966 aa15.59■□□□□ 0.09
AP001993.1-201ENST00000527317 AAMPQ13685 434 aa15.57■□□□□ 0.08
AP001993.1-201ENST00000527317 TIMELESSQ9UNS1 1208 aa15.56■□□□□ 0.08
AP001993.1-201ENST00000527317 AEBP2Q6ZN18 517 aaPredicted RBP15.54■□□□□ 0.08
AP001993.1-201ENST00000527317 ITGAEP38570 1179 aa15.54■□□□□ 0.08
AP001993.1-201ENST00000527317 KLHL34Q8N239 644 aa15.52■□□□□ 0.07
AP001993.1-201ENST00000527317 RBM10P98175 930 aaKnown RBP15.51■□□□□ 0.07
AP001993.1-201ENST00000527317 BCL11BQ9C0K0 894 aaPredicted RBP15.51■□□□□ 0.07
AP001993.1-201ENST00000527317 RSPH6AQ9H0K4 717 aa15.48■□□□□ 0.07
AP001993.1-201ENST00000527317 C11orf95C9JLR9 678 aaPredicted RBP15.48■□□□□ 0.07
AP001993.1-201ENST00000527317 NOP58Q9Y2X3 529 aaKnown RBP15.45■□□□□ 0.06
AP001993.1-201ENST00000527317 RTL5Q5HYW3 569 aaPredicted RBP15.44■□□□□ 0.06
AP001993.1-201ENST00000527317 NCBP3Q53F19 620 aaKnown RBP15.42■□□□□ 0.06
AP001993.1-201ENST00000527317 CDK11AQ9UQ88 783 aaPredicted RBP15.39■□□□□ 0.05
AP001993.1-201ENST00000527317 PAK3O75914 559 aaPredicted RBP15.38■□□□□ 0.05
AP001993.1-201ENST00000527317 WASHC2AQ641Q2 1341 aa15.33■□□□□ 0.05
AP001993.1-201ENST00000527317 RANGAP1P46060 587 aaPredicted RBP15.33■□□□□ 0.04
AP001993.1-201ENST00000527317 WASHC2CQ9Y4E1 1318 aa15.32■□□□□ 0.04
AP001993.1-201ENST00000527317 TAF7LQ5H9L4 462 aa15.32■□□□□ 0.04
AP001993.1-201ENST00000527317 BRPF3Q9ULD4 1205 aa15.29■□□□□ 0.04
AP001993.1-201ENST00000527317 ARXQ96QS3 562 aa15.27■□□□□ 0.04
AP001993.1-201ENST00000527317 KCNH8Q96L42 1107 aa15.2■□□□□ 0.02
AP001993.1-201ENST00000527317 RRP9O43818 475 aaKnown RBP15.16■□□□□ 0.02
AP001993.1-201ENST00000527317 HSP90AA2PQ14568 343 aaPredicted RBP15.16■□□□□ 0.02
AP001993.1-201ENST00000527317 FAM43AQ8N2R8 423 aa15.15■□□□□ 0.02
AP001993.1-201ENST00000527317 USP35Q9P2H5 1018 aa15.14■□□□□ 0.01
AP001993.1-201ENST00000527317 NEFMP07197 916 aa15.12■□□□□ 0.01
AP001993.1-201ENST00000527317 IPO9Q96P70 1041 aaKnown RBP15.11■□□□□ 0.01
AP001993.1-201ENST00000527317 PAXIP1Q6ZW49 1069 aaPredicted RBP15.08■□□□□ 0
AP001993.1-201ENST00000527317 ZBTB47Q9UFB7 747 aaPredicted RBP15.07■□□□□ 0
AP001993.1-201ENST00000527317 PRDM4Q9UKN5 801 aa15.05■□□□□ -0
AP001993.1-201ENST00000527317 RSPH4AQ5TD94 716 aa15.04■□□□□ -0
AP001993.1-201ENST00000527317 NAP1L2Q9ULW6 460 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms