Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 AC002347.1-201ENST00000569543 541 ntBASIC11.6□□□□□ -0.55
AP1S3Q96PC3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 AL009183.1-201ENST00000603760 355 ntBASIC11.6□□□□□ -0.55
AP1S3Q96PC3 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 AC126365.1-201ENST00000578585 1514 ntBASIC11.6□□□□□ -0.55
AP1S3Q96PC3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 PRYP6-201ENST00000514804 343 ntBASIC11.59□□□□□ -0.55
AP1S3Q96PC3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 AF238378.1-201ENST00000526806 358 ntBASIC11.59□□□□□ -0.55
AP1S3Q96PC3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 CLEC4GP1-201ENST00000596555 870 ntBASIC11.59□□□□□ -0.55
AP1S3Q96PC3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
AP1S3Q96PC3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
AP1S3Q96PC3 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC11.58□□□□□ -0.55
AP1S3Q96PC3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.58□□□□□ -0.55
AP1S3Q96PC3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC11.58□□□□□ -0.55
AP1S3Q96PC3 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.55
AP1S3Q96PC3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.58□□□□□ -0.55
AP1S3Q96PC3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
AP1S3Q96PC3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 AP002414.3-201ENST00000589352 1468 ntBASIC11.58□□□□□ -0.56
AP1S3Q96PC3 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms