Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 MIR766-201ENST00000390223 111 ntBASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 RN7SL229P-201ENST00000495651 299 ntBASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 MIR3194-201ENST00000582236 73 ntBASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 AC239859.5-201ENST00000614100 1232 ntBASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 AC034205.3-201ENST00000603595 1376 ntBASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 HLA-DQB3-203ENST00000425319 356 ntBASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 AC006372.4-201ENST00000624122 1543 ntBASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 CSAG4-201ENST00000361201 755 ntTSL 2 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 OR7E115P-201ENST00000382617 1024 ntBASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 GALP-202ENST00000440823 889 ntTSL 5 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 LAIR1-217ENST00000474878 814 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 RN7SL530P-201ENST00000485097 298 ntBASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 CSAG4-202ENST00000583763 237 ntBASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 AC123595.2-201ENST00000607854 549 ntTSL 4 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 AL356583.3-201ENST00000412354 417 ntBASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 ARL17B-202ENST00000450673 743 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 AC073089.1-201ENST00000457546 214 ntBASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 PDPN-208ENST00000509009 571 ntTSL 4 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 AC097359.3-201ENST00000603982 1210 ntBASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 AC006449.6-201ENST00000612330 2296 ntBASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 LINC01515-201ENST00000433152 1339 ntTSL 5 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 CCDC148-203ENST00000409889 1160 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 AC012066.1-201ENST00000439252 694 ntBASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 KRT19P4-201ENST00000443208 943 ntBASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC5.89□□□□□ -1.47
SYNE2Q8WXH0 HNRNPA1P56-201ENST00000505767 954 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms