Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 AC006480.2-201ENST00000609770 1337 ntBASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 SF1-209ENST00000433274 2317 ntTSL 2 BASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 FRMPD2B-201ENST00000431305 1347 ntBASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 AL136172.1-201ENST00000598590 1394 ntBASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CASKIN1Q8WXD9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 HTR7P1-202ENST00000624664 4411 ntBASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 CICP23-201ENST00000605013 2741 ntBASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 RNA5SP359-201ENST00000364838 113 ntBASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 IGHVIII-5-2-201ENST00000522505 261 ntBASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 AC026803.1-201ENST00000569130 274 ntBASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 AC138894.2-201ENST00000602838 371 ntBASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 AC051619.9-201ENST00000623237 597 ntBASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CASKIN1Q8WXD9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 CAP2P1-201ENST00000557743 1390 ntBASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 AHCYP4-201ENST00000419201 1315 ntBASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 FGFR3P1-201ENST00000449999 601 ntBASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 RN7SL181P-201ENST00000462921 277 ntBASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 SNX1-214ENST00000625244 324 ntTSL 5 BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC23.04■■□□□ 1.28
CASKIN1Q8WXD9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASKIN1Q8WXD9 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CASKIN1Q8WXD9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASKIN1Q8WXD9 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASKIN1Q8WXD9 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASKIN1Q8WXD9 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASKIN1Q8WXD9 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASKIN1Q8WXD9 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC23.03■■□□□ 1.28
CASKIN1Q8WXD9 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASKIN1Q8WXD9 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC23.03■■□□□ 1.28
CASKIN1Q8WXD9 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASKIN1Q8WXD9 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 1241.3 ms