Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 AC106760.1-201ENST00000508690 800 ntBASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 BX539320.1-201ENST00000623759 877 ntBASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 AC234783.1-201ENST00000441761 496 ntBASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 AC022137.2-201ENST00000503482 481 ntBASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 SNX29P1-201ENST00000548357 1007 ntBASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 AL022328.1-201ENST00000610050 478 ntBASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RFWD3Q6PCD5 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms