Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 AL022342.1-201ENST00000400363 863 ntBASIC11.92□□□□□ -0.5
ERVFC1-1P60608 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 AC104692.2-201ENST00000603054 253 ntBASIC11.92□□□□□ -0.5
ERVFC1-1P60608 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 AC004706.3-202ENST00000621574 984 ntBASIC11.92□□□□□ -0.5
ERVFC1-1P60608 AL805961.1-202ENST00000641562 540 ntBASIC11.92□□□□□ -0.5
ERVFC1-1P60608 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC11.92□□□□□ -0.5
ERVFC1-1P60608 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 SCARNA2-201ENST00000458748 420 ntBASIC11.91□□□□□ -0.5
ERVFC1-1P60608 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 AC073648.2-201ENST00000510116 352 ntBASIC11.91□□□□□ -0.5
ERVFC1-1P60608 AC106795.1-205ENST00000512851 1056 ntBASIC11.91□□□□□ -0.5
ERVFC1-1P60608 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 MIR5100-201ENST00000579544 119 ntBASIC11.91□□□□□ -0.5
ERVFC1-1P60608 NKAPP1-205ENST00000585790 367 ntBASIC11.91□□□□□ -0.5
ERVFC1-1P60608 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 AC008608.2-201ENST00000606089 416 ntBASIC11.91□□□□□ -0.5
ERVFC1-1P60608 AL031055.1-201ENST00000606362 631 ntBASIC11.91□□□□□ -0.5
ERVFC1-1P60608 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 AL139288.1-201ENST00000623748 933 ntBASIC11.91□□□□□ -0.5
ERVFC1-1P60608 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC11.91□□□□□ -0.5
ERVFC1-1P60608 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms